Pairwise Alignments

Query, 444 a.a., predicted (D)-galactarate transporter (NCBI) from Escherichia coli BW25113

Subject, 454 a.a., D-galacturonate transporter (MFS superfamily) (from data) from Pseudomonas simiae WCS417

 Score =  582 bits (1500), Expect = e-171
 Identities = 270/434 (62%), Positives = 349/434 (80%)

Query: 11  KGVHTRYLILLIIFIVTAVNYADRATLSIAGTEVAKELQLSAVSMGYIFSAFGWAYLLMQ 70
           K  H RYLILL++F+VT +NYADRAT++IAG+ + K+L + AV++GYIFSAFGWAY+  Q
Sbjct: 5   KPTHVRYLILLMLFLVTTINYADRATIAIAGSSLQKDLGIDAVTLGYIFSAFGWAYVAGQ 64

Query: 71  IPGGWLLDKFGSKKVYTYSLFFWSLFTFLQGFVDMFPLAWAGISMFFMRFMLGFSEAPSF 130
           IPGGWLLD+FGSKKVY  S+F WSLFT LQG+V  F ++ A +++F +RFM+G +EAPSF
Sbjct: 65  IPGGWLLDRFGSKKVYALSIFTWSLFTVLQGYVGEFGVSTAVVALFMLRFMVGLAEAPSF 124

Query: 131 PANARIVAAWFPTKERGTASAIFNSAQYFSLALFSPLLGWLTFAWGWEHVFTVMGVIGFV 190
           P NARIVAAWFPT ERGTASAIFNSAQYF+  LF+PL+GW+ +++GW+HVF VMGVIG +
Sbjct: 125 PGNARIVAAWFPTAERGTASAIFNSAQYFATVLFAPLMGWIVYSFGWQHVFIVMGVIGII 184

Query: 191 LTALWIKLIHNPTDHPRMSAEELKFISENGAVVDMDHKKPGSAAASGPKLHYIKQLLSNR 250
            + +W+K+IH+P  HP ++  E   I+ NGA+VDMD  K       GPK  YI+QLL+NR
Sbjct: 185 FSLIWLKVIHSPRQHPMINEAEFNHIAANGAMVDMDQDKGKGKKTDGPKWDYIRQLLTNR 244

Query: 251 MMLGVFFGQYFINTITWFFLTWFPIYLVQEKGMSILKVGLVASIPALCGFAGGVLGGVFS 310
           MMLGV+ GQY IN IT+FFLTWFP+YLVQ++GM+ILK G +AS+PA+CGF GGVLGGV S
Sbjct: 245 MMLGVYLGQYCINGITYFFLTWFPVYLVQDRGMTILKAGFIASLPAICGFIGGVLGGVIS 304

Query: 311 DYLIKRGLSLTLARKLPIVLGMLLASTIILCNYTNNTTLVVMLMALAFFGKGFGALGWPV 370
           DYL+++G SLT ARK PI+ G+L++S+I+ CNY +   +VV  MALAFFGKG GALGW V
Sbjct: 305 DYLLRKGHSLTFARKAPIIGGLLISSSIVACNYVDIEWMVVGFMALAFFGKGVGALGWAV 364

Query: 371 ISDTAPKEIVGLCGGVFNVFGNVASIVTPLVIGYLVSELHSFNAALVFVGCSALMAMVCY 430
           +SDT+PK+I GL GG+FN FGN+ASI TP+VIGY++S   SF  ALVFVG +AL+A+  Y
Sbjct: 365 VSDTSPKQIAGLSGGLFNTFGNLASITTPIVIGYIISTTGSFKWALVFVGANALVAVFSY 424

Query: 431 LFVVGDIKRMELQK 444
           L +VG IKR+ L++
Sbjct: 425 LVIVGPIKRVVLKE 438