Pairwise Alignments

Query, 318 a.a., putative ARAC-type regulatory protein (VIMSS) from Escherichia coli BW25113

Subject, 327 a.a., AraC family transcriptional regulator from Dickeya dianthicola 67-19

 Score =  143 bits (361), Expect = 5e-39
 Identities = 94/301 (31%), Positives = 149/301 (49%), Gaps = 6/301 (1%)

Query: 14  PKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIIL 73
           PKK RD  R      L   + +           +P + L     P      M  P I+++
Sbjct: 7   PKKQRDDYRSA----LISDIRERTPGTGDFGTAIPGLDLFRRNAPAPPVSCMIPPSIVLV 62

Query: 74  FSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLM 132
             G K  ++    + YD++ +L+ ++ LP   E T A+S+ P  GL   +D   L EL+ 
Sbjct: 63  VDGSKKMWVGGEGYEYDSSRFLVTSLDLPANSEVTEASSDRPCLGLAFKLDQRVLAELIA 122

Query: 133 DIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLT 192
             G     +    ++G+   T++E IL    RL+ +++ P    ILG  I REI Y +L 
Sbjct: 123 H-GNLSPRRDRSVSTGVGIGTVTEAILAPLCRLVALLDEPEAIPILGPMIQREIHYRLLM 181

Query: 193 GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTS 252
                 L  + +   H   I + +  ++  +   L VE+LA  A MS  +FH +F+ +T+
Sbjct: 182 SDQAARLRQVAAVDGHGHRIGKAIDWLKVNFALPLRVEELAHHAQMSTPSFHQHFRQLTA 241

Query: 253 TSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312
            SP+QY K  RL++A+ +++++    S AA  VGYES SQFSRE+ R FGV P  D A +
Sbjct: 242 MSPIQYQKWLRLNEAKRLMLNEHRDVSTAAFEVGYESPSQFSREYSRMFGVAPKRDIATL 301

Query: 313 R 313
           R
Sbjct: 302 R 302