Pairwise Alignments

Query, 328 a.a., hydrogenase 2 4Fe-4S ferredoxin-type component (NCBI) from Escherichia coli BW25113

Subject, 302 a.a., formate dehydrogenase subunit beta from Dickeya dadantii 3937

 Score =  115 bits (289), Expect = 1e-30
 Identities = 91/306 (29%), Positives = 133/306 (43%), Gaps = 55/306 (17%)

Query: 41  LYDSTLCVGCQACVTKCQDINFPERNPQGEQT--WSNNDKLSPYTNNIIQVWTSGTGVNK 98
           L D T C+GC+AC   C + N   R+  G     + N   LS  +      WT       
Sbjct: 33  LIDVTTCIGCKACQAACSEWN-DIRDEVGHNVGVYDNPADLSAKS------WTVMRFSEV 85

Query: 99  DQEENGYAYIKKQ-CMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPY 157
           + E+     I+K  CMHC +P C+  CP +        GIV +  + C GC YC+  CP+
Sbjct: 86  ESEDRLEWLIRKDGCMHCAEPGCLKACPSAGAIIQYANGIVDFQSEHCIGCGYCIAGCPF 145

Query: 158 NVPKYDYNNPFGALHKCELCNQKGVERLDKGGLPGCVEVCPAGAVIFGTREELMAEAKKR 217
           N+P+   N     ++KC LC    V+R+  G  P CV+ CP GA+ FGT+EE+   A +R
Sbjct: 146 NIPR--LNKQDNRVYKCTLC----VDRVSTGQEPACVKTCPTGAIHFGTKEEMKQLAAER 199

Query: 218 LALKPGSEYHYPRQTLKSGDTYLHTVPKYYPHLYGEKEGGGTQVLVLTGVPYENLDLPKL 277
           +A      Y       K+G             LY  +  GGT V+ +      + D P L
Sbjct: 200 VAHLQKRGYD------KAG-------------LYDPQGVGGTHVMYV----LHHADKPSL 236

Query: 278 DDLSTGARSENIQHTLYKGMMLPLAVL------AGLT---VLVRRNT-------KNDHHD 321
                     +    L+KG++ PL+ L      AGL    + +  NT       +   H+
Sbjct: 237 YHNLPDDPKISTPVNLWKGILKPLSTLGFVATFAGLMFHYIGIGPNTEETAHPHEGQPHE 296

Query: 322 GGDDHE 327
           G D HE
Sbjct: 297 GEDKHE 302



 Score = 30.4 bits (67), Expect = 6e-05
 Identities = 30/106 (28%), Positives = 41/106 (38%), Gaps = 26/106 (24%)

Query: 122 SVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACP----------YNVPKYDYNNPFGAL 171
           S+ P   ++ D        D   C GC+ C  AC           +NV  YD  NP    
Sbjct: 16  SLTPPPQVRDDKSEVAKLIDVTTCIGCKACQAACSEWNDIRDEVGHNVGVYD--NPADLS 73

Query: 172 HK----CELCNQKGVERLD----KGGL-----PGCVEVCP-AGAVI 203
            K          +  +RL+    K G      PGC++ CP AGA+I
Sbjct: 74  AKSWTVMRFSEVESEDRLEWLIRKDGCMHCAEPGCLKACPSAGAII 119