Pairwise Alignments

Query, 338 a.a., IS5 transposase and trans-activator (NCBI) from Escherichia coli BW25113

Subject, 331 a.a., Mobile element protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  280 bits (717), Expect = 3e-80
 Identities = 146/317 (46%), Positives = 201/317 (63%), Gaps = 23/317 (7%)

Query: 24  FSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYN 83
           +   R+ T+++ FL+ MEQI+PWQ +  VIEP YPKAGNGR P  LE MLR++ +QHW+N
Sbjct: 27  YEQYRKLTKRDTFLATMEQIVPWQELCSVIEPHYPKAGNGRPPIGLERMLRMYFVQHWFN 86

Query: 84  LSDGAMEDALYEIASMRLFARLSLD-SALPDRTTIMNFRHLLEQHQLARQLFKTINRWLA 142
           L+D A E+AL +  ++R F  + L    +PD TT++ FR LLE+H+L   LF  +   L 
Sbjct: 87  LADEACEEALLDSTALRRFVGIDLGRERVPDGTTLLKFRRLLEKHKLGEALFAKVGEVLQ 146

Query: 143 EAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLT 202
             G+ +  GT+VDATII APSSTKN ++QRDPEMHQT+KG QW+FGMK HIGVD+++GL 
Sbjct: 147 ARGMKVGTGTIVDATIIGAPSSTKNADKQRDPEMHQTRKGQQWYFGMKMHIGVDSRTGLA 206

Query: 203 HSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQG--------APQREELAEVDVDWLIA 254
           HS V TAAN HD + L  LLHG EQ V  D+ Y          APQ ++     V     
Sbjct: 207 HSAVVTAANVHDKHPLPELLHGNEQRVYGDSAYASQRALIESKAPQAKDFTNQRV----- 261

Query: 255 ERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQ 314
            R G++  +++    N         K+ +RARVEH F ++KR +GF K RY+GL KN  +
Sbjct: 262 RRDGEIDEVERSKNHN---------KSKVRARVEHVFAVVKRLWGFAKVRYRGLAKNATR 312

Query: 315 LAMLFTLANLFRADQMI 331
             ++  LAN++ A Q +
Sbjct: 313 SFVVLGLANIYLARQRL 329