Pairwise Alignments

Query, 338 a.a., IS5 transposase and trans-activator (NCBI) from Escherichia coli BW25113

Subject, 324 a.a., Mobile element protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  332 bits (852), Expect = 6e-96
 Identities = 166/312 (53%), Positives = 217/312 (69%), Gaps = 3/312 (0%)

Query: 17  LTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAG--NGRRPYPLETMLR 74
           ++ A+S F  K ++TRK  FL  M  ++PW  +V +I P  P  G   GR P+ +ET+LR
Sbjct: 1   MSLAESGFERKTKRTRKREFLDEMNLVVPWAELVALIAPHAPAPGLKGGRPPFAVETLLR 60

Query: 75  IHCMQHWYNLSDGAMEDALYEIASMRLFARLSL-DSALPDRTTIMNFRHLLEQHQLARQL 133
           IH +Q W+NLSD AME+ALY+    R FA L + +  +PD +TI+ FRHLLE++ L+ QL
Sbjct: 61  IHFLQQWFNLSDPAMEEALYDTPMFREFAGLDMGEDNVPDESTILRFRHLLEKNNLSLQL 120

Query: 134 FKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHI 193
             T+N  L   G+++  GT+VDAT+I APSSTKN    RDPEMHQT+KGNQWHFGMKAHI
Sbjct: 121 LATVNATLTAKGLLLKSGTVVDATLIAAPSSTKNNSGGRDPEMHQTRKGNQWHFGMKAHI 180

Query: 194 GVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLI 253
           GVDA SGL H++V TAAN +D+ Q   L+HGEE  V ADAGYQG  +REE   ++ +W +
Sbjct: 181 GVDADSGLVHTVVGTAANVNDVTQASALVHGEEADVFADAGYQGVSKREEAQRIEANWHV 240

Query: 254 AERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDN 313
           A RPGK + L +          +E++KASIRA+VEHPFR+IKRQFG VK RY+GL KN  
Sbjct: 241 AMRPGKRKALDKVTPMGAVLDKLEHVKASIRAKVEHPFRVIKRQFGHVKVRYRGLAKNTA 300

Query: 314 QLAMLFTLANLF 325
           QL  LF L+NL+
Sbjct: 301 QLHTLFALSNLW 312