Pairwise Alignments

Query, 577 a.a., ssDNA exonuclease, 5' --> 3'-specific (NCBI) from Escherichia coli BW25113

Subject, 577 a.a., single-stranded-DNA-specific exonuclease RecJ from Escherichia coli ECRC100

 Score = 1141 bits (2952), Expect = 0.0
 Identities = 574/577 (99%), Positives = 576/577 (99%)

Query: 1   MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKA 60
           +KQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKA
Sbjct: 1   VKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKA 60

Query: 61  VEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPE 120
           VEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPE
Sbjct: 61  VEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPE 120

Query: 121 VVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTDHHLPGDTLPAAEAIINPNLR 180
           VVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTDHHLPGDTLPAAEAIINPNLR
Sbjct: 121 VVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTDHHLPGDTLPAAEAIINPNLR 180

Query: 181 DCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERNIAIPNLAELLDLVALGTVADVVPL 240
           DCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDER IAIPNLAELLDLVALGTVADVVPL
Sbjct: 181 DCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIAIPNLAELLDLVALGTVADVVPL 240

Query: 241 DANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQKLAASDLGFALGPRLNAAGRLDDM 300
           DANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQKLAASDLGFALGPRLNAAGRLDDM
Sbjct: 241 DANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQKLAASDLGFALGPRLNAAGRLDDM 300

Query: 301 SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQIEALTLCEKLERSRDTLPGGLAM 360
           SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQIEALTLCEKLERSRDTLPGGLAM
Sbjct: 301 SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQIEALTLCEKLERSRDTLPGGLAM 360

Query: 361 YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP 420
           YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
Sbjct: 361 YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP 420

Query: 421 GMMLKFGGHAMAAGLSLEEDKFKLFQQRFGELVTEWLDPSLLQGEVVSDGPLSPAEMTME 480
           GMMLKFGGHAMAAGLSLEEDKF+LFQQRFGELVTEWLDPSLLQGEVVSDGPLSPAEMTME
Sbjct: 421 GMMLKFGGHAMAAGLSLEEDKFELFQQRFGELVTEWLDPSLLQGEVVSDGPLSPAEMTME 480

Query: 481 VAQLLRDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTA 540
           VAQLLRDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTA
Sbjct: 481 VAQLLRDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTA 540

Query: 541 LWPDNGVREVQLAYKLDINEFRGNRSLQIIIDNIWPI 577
           LWPDNGVREVQLAYKLDINEFRGNRSLQIIIDNIWPI
Sbjct: 541 LWPDNGVREVQLAYKLDINEFRGNRSLQIIIDNIWPI 577