Pairwise Alignments

Query, 398 a.a., diaminopropionate ammonia-lyase (NCBI) from Escherichia coli BW25113

Subject, 340 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score = 61.2 bits (147), Expect = 4e-14
 Identities = 77/329 (23%), Positives = 142/329 (43%), Gaps = 46/329 (13%)

Query: 45  TPLCALDDLANLFGVKKILVKDESKRFGLNAFKMLGGAYAIAQLLCEKYHLDIETLSFEH 104
           TPL A   L+ L G + +L +++ +     +FK+ G    + QL  E+    + T S   
Sbjct: 34  TPLQAAPALSALLGNQVLLKREDLQP--TFSFKIRGAYNKLVQLTPEQRARGVVTASA-- 89

Query: 105 LKNAIGEKMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVT 164
                           GNH +GVA AA++LG  A I MP  + + +V  + + GA+ ++ 
Sbjct: 90  ----------------GNHAQGVALAARELGIKARIVMPASTPELKVLGVRSRGAQAVLH 133

Query: 165 DMNYDDTVRLTMQHAQQHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTP 224
             ++   +   +Q A+  G   V              ++ G  T+   A+E +R+     
Sbjct: 134 GASFPFALAYALQLAESSGCTFVSPFD-------DPDVIAGQGTV---AMEILRQQQGPL 183

Query: 225 THVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCI---YRSGVKGDIVNVGGD 281
             + +  G G +  GV  Y+   Y   ++  I VEP+ + C+    R+G +  + +V G 
Sbjct: 184 DAIFVPVGGGGLIAGVAAYV--KYLRPDVRIIGVEPEGSSCLLAALRAGERVVLPSVDG- 240

Query: 282 MATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGA 341
                 G A  +    G+EI R+   + I+  +      ++++     +D R I+  SGA
Sbjct: 241 ---FADGTAVAQVGAHGFEICRDWVDEVITVSNDALCSAIKLI----YDDTRSITEPSGA 293

Query: 342 VGL-GVLAAVHYHPQRQSLMEKLALNKDA 369
           + + G+   V  H  R   +  +A+N  A
Sbjct: 294 LAVAGIRQYVATHNLRGQTL--VAINSGA 320