Pairwise Alignments

Query, 592 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 441 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

 Score =  251 bits (640), Expect = 6e-71
 Identities = 137/320 (42%), Positives = 207/320 (64%), Gaps = 17/320 (5%)

Query: 271 QLVGECRVMRQLKRLISRIAPSPSSVMVVGESGTGKEVVARAIHKLSGRRNKPFIAINCA 330
           +L+GE R +R+L++L+ ++AP+ S V++ GESGTGKE+VAR +H+ S R  +PFIAINC 
Sbjct: 137 ELLGESRPIRELRKLLGKLAPTESPVLIRGESGTGKELVARTLHRQSQRSEQPFIAINCG 196

Query: 331 AIPEQLLESELFGYVKGAFTGASANGKTGLIQAANTGTLFLDEIGDMPLMLQAKLLRAIE 390
           AIPE L++SELFG+ KGAFTGA    KTG I+AA+ GTLFLDEIGD+PL LQA LLR ++
Sbjct: 197 AIPEHLIQSELFGHEKGAFTGAHQR-KTGRIEAADGGTLFLDEIGDLPLELQANLLRFLQ 255

Query: 391 AREILPIGASSPIQVDIRIISATNQNLAQFIAEGKFREDLFYRLNVIPITLPPLRERQED 450
            + I  +G S PI VD+R+++AT+ +L + I +G+FREDL+YRLNV+ +   PLR+R  D
Sbjct: 256 EKHIERVGGSQPIPVDVRVLAATHVDLERAIEQGRFREDLYYRLNVLQVVTAPLRDRHGD 315

Query: 451 IELLVHYFLHLHTRRLGSVYPGIAPDVVEILRKHRWPGNLRELSNLMEYLVNVVPSGEVI 510
           + +L ++F H ++   G      +   +  + +H WPGN+REL+N +   + V+  G  I
Sbjct: 316 LSMLANHFAHFYSVETGRRPRSFSDHALAAMGRHDWPGNVRELANRVRRGL-VLAEGRQI 374

Query: 511 DSTLLPPNLLNNGTTEQSDVTEVSEAHLSLDDAGGTALEEMEKQMIREALSRHNSKKQVA 570
           ++  L   LL+    EQ  +  + E             +  E+Q + + L+RH+    VA
Sbjct: 375 EAQDLGLQLLD---PEQQPLGTLEEYK-----------QRAERQALCDVLNRHSDNLSVA 420

Query: 571 DE-LGIGIATLYRKIKKYEL 589
            + LGI   T YR + K+++
Sbjct: 421 AKVLGISRPTFYRLLHKHQI 440