Pairwise Alignments

Query, 301 a.a., IS2 insertion element transposase InsAB' (NCBI) from Escherichia coli BW25113

Subject, 309 a.a., IS3 family transposase from Agrobacterium fabrum C58

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 18/253 (7%)

Query: 43  RSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALL 102
           RS    + ++ LR+  +  E   +GYRR++ LLRR  E  G+      R+YR+ R+  L 
Sbjct: 39  RSCRPPEVELRLRLRDLANERRRFGYRRLFILLRRDGEPSGV-----NRIYRLYREEGLS 93

Query: 103 LERKPAVPPSKRAHTGRVAVKESNQRWCSDGF--EFCCDNGERLRVTFALDCCDREALHW 160
           + ++ A   +       +   ++N RW  D    +F C  G R RV   +D   RE L  
Sbjct: 94  VRKRKARRRAVGTRAPILVEAKANARWSLDFVHDQFAC--GRRFRVLNIVDDVTRECLA- 150

Query: 161 AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPK 220
           A+     +   V   +   + RR        P   ++DNG+   +N    +++   ++  
Sbjct: 151 AIPDTSISGRRVARELTALIPRR------GKPGVIVSDNGTELTSNAILAWSKDHKVDWH 204

Query: 221 NTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKN-LAEAFEHYNEWHPHSALGYR 279
             A   P  NG  ESF   + RD +       GL  A++ +AE  + YN + PHS+LGY+
Sbjct: 205 YIAPGRPMQNGYVESFNGRM-RDELLNESLFFGLDHARSAIAEWADDYNHFRPHSSLGYQ 263

Query: 280 SPREYLRQRACNG 292
           +P  Y    A  G
Sbjct: 264 TPAAYAGTIAATG 276