Pairwise Alignments

Query, 243 a.a., DNA-binding transcriptional activator (NCBI) from Escherichia coli BW25113

Subject, 267 a.a., DeoR-type transcriptional regulator YihW from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 92.4 bits (228), Expect = 8e-24
 Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 4/230 (1%)

Query: 5   RQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQTQGKILRNHGRAKYIHRQNQD 64
           R   ++ L+     +  + L+  L+VS +T+RRD+ +L  QG I R+HG A    R +  
Sbjct: 11  RHDRLLMLIDERGYMNIDELASLLEVSTQTVRRDIRKLSEQGLITRHHGGAG---RASSV 67

Query: 65  SGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALDASSTCWYLARQLPDIN-IQVFTNS 123
               F  R  S    K  IA     +I +G  I +   +T   +AR L + N +++ TNS
Sbjct: 68  VNTAFEQREVSWTQEKKAIAEAVADYIPDGSTIFITIGTTVEQVARALLNHNHLRIITNS 127

Query: 124 HPICHELGKRERIQLISSGGTLERKYGCYVNPSLISQLKSLEIDLFIFSCEGIDSSGALW 183
             + H L    R +++  GGTL       + PS  + +     D  + S   I+S GAL 
Sbjct: 128 LRVAHILYNNPRFEVMVPGGTLRPHNSGIIGPSAAAFVAGFRADYLVTSVGAIESDGALL 187

Query: 184 DSNAINADYKSMLLKRAAQSLLLIDKSKFNRSGEARIGHLDEVTHIISDE 233
           + +   A     ++  +   LL  D +K++ S    IG++ ++T + +DE
Sbjct: 188 EFDVNEASVVKTMMAHSRHILLAADHTKYHASAAVEIGNVSQITALFTDE 237