Pairwise Alignments

Query, 243 a.a., DNA-binding transcriptional activator (NCBI) from Escherichia coli BW25113

Subject, 261 a.a., putative transcriptional regulator for sulfoquinovose utilization from Escherichia coli BL21

 Score = 98.2 bits (243), Expect = 1e-25
 Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 4/230 (1%)

Query: 5   RQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQTQGKILRNHGRAKYIHRQNQD 64
           R   ++ L+     +  + L+  L VS +T+RRD+ +L  QG I R+HG A    R +  
Sbjct: 11  RHDQLLMLIAERGYMNIDELANLLDVSTQTVRRDIRKLSEQGLITRHHGGAG---RASSV 67

Query: 65  SGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALDASSTCWYLARQLPDIN-IQVFTNS 123
               F  R  S    K  IA     +I +G  I +   +T  ++AR L + N +++ TNS
Sbjct: 68  VNTAFEQREVSQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARALLNHNHLRIITNS 127

Query: 124 HPICHELGKRERIQLISSGGTLERKYGCYVNPSLISQLKSLEIDLFIFSCEGIDSSGALW 183
             + H L    R +++  GGTL       + PS  S +     D  + S   I+S GAL 
Sbjct: 128 LRVAHILYHNPRFEVMVPGGTLRSHNSGIIGPSAASFVADFRADYLVTSVGAIESDGALM 187

Query: 184 DSNAINADYKSMLLKRAAQSLLLIDKSKFNRSGEARIGHLDEVTHIISDE 233
           + +   A+    ++  A   LL+ D +K++ S    IG++ +VT + +DE
Sbjct: 188 EFDVNEANVVKTMMAHARNILLVADHTKYHASAAVEIGNVAQVTALFTDE 237