Pairwise Alignments

Query, 502 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

Subject, 511 a.a., type I-E CRISPR-associated protein Cse1/CasA from Dickeya dianthicola 67-19

 Score = 71.2 bits (173), Expect = 8e-17
 Identities = 83/308 (26%), Positives = 130/308 (42%), Gaps = 35/308 (11%)

Query: 4   LIDN-WIPVRPRNGGKVQIINLQSLYCSRDQW-RLSLPRDDMELAALALLVCIGQIIAPA 61
           LID  W+PV   +G + +I   Q    + D+   L+ PR D + AA  LL+ + Q     
Sbjct: 4   LIDTPWLPVVGADGHRTRISPRQ---LANDKIIDLACPRPDFQGAAWQLLIGLLQTAYSP 60

Query: 62  KDDVEFRHRIMNPLTEDEFQQL--IAPWIDMFYLNHAEHP-FMQTKGVKANDVTPMEKLL 118
            DD  +     + L E   Q L  +AP ++      A+ P FMQ       D +P+  LL
Sbjct: 61  PDDEAWEDIWRDGLGESWVQALDTLAPALNF----GADKPAFMQDFSSLEADNSPISGLL 116

Query: 119 AGVSGAT----NCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPVTT 174
             V GAT    N     + G   A+C  C A+AL+     AP  G G + G+RGG P+TT
Sbjct: 117 IDVPGATALKRNTDHFAKRGTVNAICPHCAALALYTLQTNAPSGGVGHRVGVRGGGPITT 176

Query: 175 FVRGIDLRSTVLLNVLTLPRLQKQFPNESHTENQP------TWIKPIKSNE----SIPAS 224
            +   D ++ V       P  +K + N +  E          W+   +++E     +   
Sbjct: 177 LLMPYDAQNPV-------PLWRKLWANVTPGERGRCDASVFPWLAATRTSEGDKDKVTPE 229

Query: 225 SIGFVRGLFWQPAHIEL-CDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSP 283
           +   ++  +  P  IEL       G C  CG  S+   T +  + +       W HP +P
Sbjct: 230 NAHPLQAFWGMPRRIELDFGHTETGHCDLCGDSSDHLLTHYRTKNYGVQYEH-WLHPLTP 288

Query: 284 CLVTVKKG 291
              ++K G
Sbjct: 289 YRQSLKDG 296