Pairwise Alignments

Query, 330 a.a., RNA polymerase sigma factor (NCBI) from Escherichia coli BW25113

Subject, 330 a.a., RNA polymerase sigma factor RpoS from Dickeya dianthicola ME23

 Score =  602 bits (1553), Expect = e-177
 Identities = 307/330 (93%), Positives = 322/330 (97%)

Query: 1   MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEQEPSDNDLAEEELLSQGATQRVLDATQL 60
           MSQNTLKV++L+EDAEFDENGV+VFD+KAL E+E SD+DL +EELLSQG  QRVLDATQL
Sbjct: 1   MSQNTLKVNELHEDAEFDENGVDVFDDKALAEEETSDSDLLDEELLSQGTAQRVLDATQL 60

Query: 61  YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLI 120
           YLGEIGYSPLLTAEEEVYFARRALRGDV+SRRRMIESNLRLVVKIARRY NRGLALLDLI
Sbjct: 61  YLGEIGYSPLLTAEEEVYFARRALRGDVSSRRRMIESNLRLVVKIARRYNNRGLALLDLI 120

Query: 121 EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR 180
           EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
Sbjct: 121 EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR 180

Query: 181 TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD 240
           TARELSHKLDHEPSAEEIAE+LDKPVDDV+RMLRLNERITSVDTPLGGDSEKALLDILAD
Sbjct: 181 TARELSHKLDHEPSAEEIAERLDKPVDDVNRMLRLNERITSVDTPLGGDSEKALLDILAD 240

Query: 241 EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE 300
           EK+NGPEDTTQD+DMKQ+IVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
Sbjct: 241 EKDNGPEDTTQDNDMKQNIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE 300

Query: 301 RVRQIQVEGLRRLREILQTQGLNIEALFRE 330
           RVRQIQVEGLRRLREILQ QGL+IE LFRE
Sbjct: 301 RVRQIQVEGLRRLREILQVQGLDIEELFRE 330