Pairwise Alignments

Query, 255 a.a., predicted DNA-binding transcriptional regulator (RefSeq) from Escherichia coli BW25113

Subject, 270 a.a., Glucitol operon repressor from Alteromonas macleodii MIT1002

 Score =  116 bits (290), Expect = 5e-31
 Identities = 85/257 (33%), Positives = 132/257 (51%), Gaps = 9/257 (3%)

Query: 5   ERRQIILEMVAEKGIVSIAELTDRMNVSHMTIRRDLQKLEQQGAVVLVSGG---VQSPGR 61
           +RRQ I+  V E G   + +L  R   S +TIR+DL  L QQG ++   GG   V S   
Sbjct: 9   QRRQQIVAWVKEHGQSQVEDLAVRFATSEVTIRKDLAALSQQGLLIRQFGGAVPVPSSTN 68

Query: 62  VAHEPSHQVKT---ALAMTQKA--AIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMES 116
               PS  + +   A + T  A  AIG+LAASLV+PG+ + +D G+TT +I  HL H + 
Sbjct: 69  SNAGPSQFITSDPFANSTTSPAINAIGQLAASLVKPGNKLVIDCGSTTASILPHLSHADD 128

Query: 117 LTVVTNDFVIADYLLDN-SNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASS 175
           L V+TN    A+YL  +    T++  GG    +++S  G  A  ++ +   D AFI A+ 
Sbjct: 129 LVVMTNTLSTANYLTQSEKEPTVLMVGGTWDAQSQSFQGAMAEQLVSAYSFDFAFIGAAG 188

Query: 176 WSVRGISTPAEDKVTVKRAIASASRQRVLVCDATKYGQVATWLALPLSEFDQIITDDGLP 235
             V   +T   + + V RA+A A+ + V+V  + K       L L       +ITD+G+ 
Sbjct: 189 IDVNRGTTTFNELIGVTRAMAVAASKVVIVASSKKLTHKMPNLELSWKNISVLITDEGIC 248

Query: 236 ESASRALVKQDLSLLVA 252
           E     +  Q +++L+A
Sbjct: 249 EQDKLNIENQGVTVLIA 265