Pairwise Alignments

Query, 692 a.a., DNA-binding transcriptional activator (NCBI) from Escherichia coli BW25113

Subject, 725 a.a., formate hydrogenlyase transcriptional activator FlhA from Dickeya dadantii 3937

 Score =  622 bits (1604), Expect = 0.0
 Identities = 367/709 (51%), Positives = 458/709 (64%), Gaps = 32/709 (4%)

Query: 6   MSDLGQQGLFDITRTLLQQ---PDLASLCEALSQLVKRSALADNAAIVLWQAQTQRASYY 62
           +S L Q  L  I+++LLQQ   PDL    + +S  V R    +   I+L     Q   Y 
Sbjct: 12  LSILWQDALLKISQSLLQQRTIPDLLRALDGVSFSVVRFGRVN--LILLDPLHNQMNFYR 69

Query: 63  ASREKDTPIKYEDETVLAHGPVRSILSRPDTLHCSYEEFCETWPQLDAGGLYPKFGHYCL 122
             RE       E+  +LA+GP   + S    LHC    F   +P L     Y     YC 
Sbjct: 70  HDRESGQTQCSEEAILLANGPGGVVWSTQTPLHCDRTHFLRDFPHLTDQPAYAGLSDYCQ 129

Query: 123 MPLAAEGHIFGGCEFIRYDDRPWSEKEFNRLQTFTQIVSVVTEQIQSRVVNNVDYELLCR 182
           +PL       GG EFI+ D   +++ E +  Q    +V++V E I  R     + E L  
Sbjct: 130 LPLCGMHRGLGGVEFIKTDGSRFTDNERDFFQALAGVVALVVENISEREQVLQEEERLRH 189

Query: 183 ERDNFRILVAITNAVLSRLDMDELVSEVAKEIHYYFDIDDISIVLRSHRKNK--LNIYST 240
           ERD+ RILV +TN V+S+L++  L  EV++EIH +F ID I++VL+    +   L   +T
Sbjct: 190 ERDHLRILVDVTNTVISKLELKALALEVSREIHRFFGIDFIALVLKEGEGDTPALKYLAT 249

Query: 241 HYLDKQHPAHEQSEVDEAGTLTERVFKSKEMLLINLHERDDLAPYERMLFDTWGNQIQTL 300
            Y     P   Q EV+ A TL + V    +  LI + ER       R L   +  ++  +
Sbjct: 250 LYPQSGAPKTVQGEVERAQTLADGVMAQHQPQLIRVTERPQRGE-PRPLCQWFDRELSHV 308

Query: 301 CLLPLMSGDTMLGVLKLAQCEEKVFTTTNLNLLRQIAERVAIAVDNALAYQEIHRLKERL 360
           CLLPL  G+  LGVL+LA       +  +L LLRQIA R+AIA+DNALAY++I RLK+ L
Sbjct: 309 CLLPLAFGNRTLGVLELAHRSALAVSEADLRLLRQIAARIAIALDNALAYEQITRLKDSL 368

Query: 361 VDENLALTEQLNN-----VDSEFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGK 415
           + EN  LTEQL          EFGEIIGRS A+  VL+QVEMVA SDSTVLILGETGTGK
Sbjct: 369 IHENFYLTEQLTEHIHQRSGDEFGEIIGRSAAIRQVLEQVEMVAASDSTVLILGETGTGK 428

Query: 416 ELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKS 475
           ELIARAIH+LS R  + MVKMNCAA+P+GLLESDLFGHE+GAFTGA++QR GRFE AD S
Sbjct: 429 ELIARAIHSLSQRKAQHMVKMNCAAIPSGLLESDLFGHEKGAFTGATSQRQGRFEQADNS 488

Query: 476 SLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADREFR 535
           +LFLDEVGD+PLELQPKLLRVLQE+E ERLG +K+I  DVRLIAATNRDLK+MVADRE+R
Sbjct: 489 TLFLDEVGDIPLELQPKLLRVLQEREIERLGGSKVISVDVRLIAATNRDLKQMVADREYR 548

Query: 536 SDLYYRLNVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSNMEWP 595
           SDLYYRLNVFPI +PPLRERPEDIPLL K FT KIARR+ R IDSIP++ LR LS + WP
Sbjct: 549 SDLYYRLNVFPIVIPPLRERPEDIPLLVKFFTRKIARRMNRTIDSIPSDMLRQLSRLPWP 608

Query: 596 GNVRELENVIERAVLLTRGNVLQLSLPD-------IVLPEP-----------ETPPAATV 637
           GNVRELENV+ERAV+LTRG  L L + +       + +P+P             PP+  +
Sbjct: 609 GNVRELENVVERAVILTRGTTLNLQIDELQHHLSPLEVPKPAHRDFPPPPVAAEPPSGQL 668

Query: 638 VALEGEDEYQLIVRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMKRLGI 686
            A E E E + I+RVL+ETNG+VAGPKGAA RLGLKRTTLLSRM+R+GI
Sbjct: 669 DADE-ESERERIIRVLRETNGIVAGPKGAAARLGLKRTTLLSRMQRMGI 716