Pairwise Alignments

Query, 692 a.a., DNA-binding transcriptional activator (NCBI) from Escherichia coli BW25113

Subject, 461 a.a., fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein from Escherichia coli BL21

 Score =  263 bits (671), Expect = 2e-74
 Identities = 149/320 (46%), Positives = 201/320 (62%), Gaps = 12/320 (3%)

Query: 377 EFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKM 436
           ++G I+  S AM  + K    +A S ++VLI GE+GTGKELIARAIH  S R     +K+
Sbjct: 141 QWGHILTNSPAMMDICKDTAKIALSQASVLISGESGTGKELIARAIHYNSRRAKGPFIKV 200

Query: 437 NCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRV 496
           NCAA+P  LLES+LFGHE+GAFTGA   R G FE A++ +L LDE+G+MPL LQ KLLR+
Sbjct: 201 NCAALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGTLLLDEIGEMPLVLQAKLLRI 260

Query: 497 LQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIHLPPLRERP 556
           LQE+EFER+G ++ I+ D+R+IAATNRDL+ MV +  FR DL+YRLNV  + LPPLR+R 
Sbjct: 261 LQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFREDLFYRLNVIHLILPPLRDRR 320

Query: 557 EDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELENVIERAVLLTRGNV 616
           EDI LLA  F  K +    R+I  I    +  L+   WPGN+REL NVIERAV++  G +
Sbjct: 321 EDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPGNIRELSNVIERAVVMNSGPI 380

Query: 617 L-------QLSLPDIVLPEPETPPAATVVALE--GEDEYQLIVRVLKETNGVVAGPKGAA 667
           +       Q+  P     E +T P       E     E ++I+ VL++  G        A
Sbjct: 381 IFSEDLPPQIRQPVCNAGEVKTAPVGERNLKEEIKRVEKRIIMEVLEQQEG---NRTRTA 437

Query: 668 QRLGLKRTTLLSRMKRLGID 687
             LG+ R  L+ +++  GID
Sbjct: 438 LMLGISRRALMYKLQEYGID 457