Pairwise Alignments

Query, 504 a.a., putative 2-component transcriptional regulator (VIMSS) from Escherichia coli BW25113

Subject, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

 Score =  451 bits (1159), Expect = e-131
 Identities = 254/511 (49%), Positives = 333/511 (65%), Gaps = 17/511 (3%)

Query: 8   LANIAIELQRGIGHQDRFQRLITTLRQVLECDASALLRYDSRQFIPLAIDGLAKDVLGRR 67
           L  +  +L R +  Q+R++RL+  +R +L CDA+ALLR D    +PLA+DGL+ D LGRR
Sbjct: 10  LLPLVSDLSRDLPDQERYRRLLQAMRGLLPCDAAALLRLDGEWLVPLAVDGLSPDTLGRR 69

Query: 68  FALEGHPRLEAIARAGDVVRFPADSELPDPYDGLIPGQES-LKVHACVGLPLFAGQNLIG 126
           F +  HPR + +    +  RF +DSELPDPYDGL+   ++ L+VH C+G PL   +   G
Sbjct: 70  FRVSEHPRFQILLSRPEPTRFASDSELPDPYDGLVNAPDADLEVHDCMGCPLMVDERPWG 129

Query: 127 ALTLDGMQPDQFDVFSDEELRLIAALAAGALSNALLIEQLESQNMLPGDATPFEAVKQT- 185
            +TLD + P QF     + L+  A+LAA  ++ A  IE L  +     +    E  +Q  
Sbjct: 130 LVTLDALTPGQFQSLELDALQAFASLAAATVTVAERIEHLALR--AEDEHHRAELYRQAS 187

Query: 186 ----QMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVY 241
               ++IG SP   +L +EI +V +SDL VLI+GETG GKELVA+A+H AS RA  PLV 
Sbjct: 188 GQDRELIGQSPAHKRLVEEIRLVGSSDLTVLITGETGVGKELVAQALHRASSRADKPLVS 247

Query: 242 LNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLR 301
           LNCAALP+++ ESELFGHV+GAFTGA   R GKFE+A+ GTLFLDE+GEL L +QAKLLR
Sbjct: 248 LNCAALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLR 307

Query: 302 VLQYGDIQRVGDDRCLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLSVPPLRER 361
           VLQ G +QR+G DR  RVDVR++AATNRDL  EV  G FRAD +HRLSV+PL VPPLRER
Sbjct: 308 VLQSGQLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRADFYHRLSVYPLHVPPLRER 367

Query: 362 GDDVILLAGYFCEQCRLRQGLSRVVLSAGARNLLQHYSFPGNVRELEHAIHRAVVLARAT 421
           G DV+LLAGYF EQ R R GL+ + LS  A+  L  Y +PGNVRELEH I R+ + A   
Sbjct: 368 GRDVLLLAGYFLEQNRSRLGLNSLRLSHEAQAALIAYDWPGNVRELEHLIGRSALKALGQ 427

Query: 422 RSG-------DEVILEAQHFAFPEVTLPTP--EVAAVPVVKQNLREATEAFQRETIRQAL 472
                     + + L+ +  A    TLP+P   +  V   +  LREA +++QR+ I   L
Sbjct: 428 HPDRPRILTLEAIDLDLRVSATTPGTLPSPAAPLQVVTPPEGGLREAVDSYQRQVIEACL 487

Query: 473 AQNHHNWAACARMLETDVANLHRLAKRLGLK 503
            ++  NWAA AR L  D ANL RLA+RLGL+
Sbjct: 488 QRHQDNWAAAARELGLDRANLSRLARRLGLR 518