Pairwise Alignments

Query, 504 a.a., putative 2-component transcriptional regulator (VIMSS) from Escherichia coli BW25113

Subject, 687 a.a., Formate hydrogenlyase transcriptional activator from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  255 bits (651), Expect = 4e-72
 Identities = 148/375 (39%), Positives = 223/375 (59%), Gaps = 18/375 (4%)

Query: 97  PYDGLIPGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGA 156
           PY+ ++      ++     LPL +G+ ++G L L   +   F   + + LR IA   A A
Sbjct: 279 PYERMLFDTWGNQIQTLCLLPLMSGKTMLGVLKLAQCEEKVFTTANLKLLRQIAERVAIA 338

Query: 157 LSNAL-------LIEQLESQNMLPGDATPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDL 209
           + NAL       L E+L  +N+   +       +  ++IG S  M  + K++E+VA SD 
Sbjct: 339 VDNALAYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYNVLKQVEMVAQSDS 398

Query: 210 NVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAIS 269
            VLI GETGTGKEL+A+AIH  S R+   +V +NCAA+P  + ES+LFGH +GAFTGA +
Sbjct: 399 TVLILGETGTGKELIARAIHNLSGRSGRRMVKMNCAAMPAGLLESDLFGHERGAFTGASA 458

Query: 270 NRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRCLRVDVRVLAATNR 329
            R G+FE+AD  +LFLDE+G++ L LQ KLLRVLQ  + +R+G ++ ++ DVR++AATNR
Sbjct: 459 QRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKLIQTDVRLIAATNR 518

Query: 330 DLREEVLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRQGLSRVVLSA 389
           DL++ V    FR DL++RL+VFP+ +PPLRER +D+ LL   F  +   R G +   + A
Sbjct: 519 DLKKMVADREFRNDLYYRLNVFPIQLPPLRERPEDIPLLVKAFTFKIARRMGRNIDSIPA 578

Query: 390 GARNLLQHYSFPGNVRELEHAIHRAVVLARATRSGDEVILEAQHFAFPEVTLPTPEVAAV 449
                L    +PGNVRELE+ + RAV+L R               + P++T  TP+ +  
Sbjct: 579 ETLRTLSSMEWPGNVRELENVVERAVLLTRG---------NVLQLSLPDITAVTPDTS-- 627

Query: 450 PVVKQNLREATEAFQ 464
           PV  ++ +E  + +Q
Sbjct: 628 PVATESDKEGEDEYQ 642