Pairwise Alignments

Query, 504 a.a., putative 2-component transcriptional regulator (VIMSS) from Escherichia coli BW25113

Subject, 524 a.a., nif-specific transcriptional activator NifA from Dickeya dianthicola ME23

 Score =  267 bits (683), Expect = 6e-76
 Identities = 152/302 (50%), Positives = 198/302 (65%), Gaps = 9/302 (2%)

Query: 187 MIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAA 246
           M+G S  M Q  + +  V+  D  VL+ GE+GTGKELVA AIH  SPRA  P V  NCAA
Sbjct: 209 MVGTSAAMRQTLEIVRQVSRWDTTVLVRGESGTGKELVANAIHHNSPRAAAPFVKFNCAA 268

Query: 247 LPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYG 306
           LP+++ ESELFGH KGAFTGA+  R G+FE+AD GTLFLDEIGE S + QAKLLR+LQ G
Sbjct: 269 LPDNLLESELFGHEKGAFTGAVRQRKGRFELADGGTLFLDEIGESSASFQAKLLRILQEG 328

Query: 307 DIQRVGDDRCLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLSVPPLRERGDDVI 366
           +++RVG D  LRV+VR++AATNR L EEV AG FR DL++RL+V P+S+PPLRER +D++
Sbjct: 329 EMERVGGDETLRVNVRIIAATNRHLEEEVRAGHFREDLYYRLNVMPVSLPPLRERQEDIV 388

Query: 367 LLAGYFCEQCRLRQGLSRVVLSAGARNLLQHYSFPGNVRELEHAIHRAVVLARATRSGDE 426
            LA +  ++    QG + + +S GA  LL  Y++PGNVRELE+ + RA V+        +
Sbjct: 389 ELAQFLVKKIAAHQGRT-LRISDGAIRLLMGYNWPGNVRELENCLERAAVMTDTGLIDRD 447

Query: 427 VILEAQHFAFPEV--TLPTPEVAAVPVVKQNLREATEAFQRETIRQALAQNHHNWAACAR 484
           VIL   H A P +  T   P VA    + QNL E      R+ +  AL +     A  AR
Sbjct: 448 VILFNHHDAAPMMNKTTSPPAVAEEGWLDQNLDE------RQRLIAALEKTGWVQAKAAR 501

Query: 485 ML 486
           +L
Sbjct: 502 LL 503