Pairwise Alignments

Query, 504 a.a., putative 2-component transcriptional regulator (VIMSS) from Escherichia coli BW25113

Subject, 725 a.a., formate hydrogenlyase transcriptional activator FlhA from Dickeya dadantii 3937

 Score =  260 bits (665), Expect = 1e-73
 Identities = 173/412 (41%), Positives = 232/412 (56%), Gaps = 34/412 (8%)

Query: 111 HACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNALLIEQLE--S 168
           H C+ LPL  G   +G L L               LR IAA  A AL NAL  EQ+    
Sbjct: 307 HVCL-LPLAFGNRTLGVLELAHRSALAVSEADLRLLRQIAARIAIALDNALAYEQITRLK 365

Query: 169 QNMLPGDATPFEAVKQT----------QMIGLSPGMTQLKKEIEIVAASDLNVLISGETG 218
            +++  +    E + +           ++IG S  + Q+ +++E+VAASD  VLI GETG
Sbjct: 366 DSLIHENFYLTEQLTEHIHQRSGDEFGEIIGRSAAIRQVLEQVEMVAASDSTVLILGETG 425

Query: 219 TGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMA 278
           TGKEL+A+AIH  S R    +V +NCAA+P  + ES+LFGH KGAFTGA S R G+FE A
Sbjct: 426 TGKELIARAIHSLSQRKAQHMVKMNCAAIPSGLLESDLFGHEKGAFTGATSQRQGRFEQA 485

Query: 279 DNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRCLRVDVRVLAATNRDLREEVLAG 338
           DN TLFLDE+G++ L LQ KLLRVLQ  +I+R+G  + + VDVR++AATNRDL++ V   
Sbjct: 486 DNSTLFLDEVGDIPLELQPKLLRVLQEREIERLGGSKVISVDVRLIAATNRDLKQMVADR 545

Query: 339 RFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRQGLSRVVLSAGARNLLQHY 398
            +R+DL++RL+VFP+ +PPLRER +D+ LL  +F  +   R   +   + +     L   
Sbjct: 546 EYRSDLYYRLNVFPIVIPPLRERPEDIPLLVKFFTRKIARRMNRTIDSIPSDMLRQLSRL 605

Query: 399 SFPGNVRELEHAIHRAVVLARATRSGDEVILEAQHFAFP-EV------TLPTPEVAAVPV 451
            +PGNVRELE+ + RAV+L R T    + I E QH   P EV        P P VAA P 
Sbjct: 606 PWPGNVRELENVVERAVILTRGTTLNLQ-IDELQHHLSPLEVPKPAHRDFPPPPVAAEPP 664

Query: 452 VKQNLREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGLK 503
             Q   +A E  +RE I + L           R     VA     A RLGLK
Sbjct: 665 SGQ--LDADEESERERIIRVL-----------RETNGIVAGPKGAAARLGLK 703