Pairwise Alignments

Query, 504 a.a., putative 2-component transcriptional regulator (VIMSS) from Escherichia coli BW25113

Subject, 441 a.a., fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein from Escherichia coli BL21

 Score =  253 bits (647), Expect = 7e-72
 Identities = 147/313 (46%), Positives = 200/313 (63%), Gaps = 18/313 (5%)

Query: 177 TPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAV 236
           TP     Q  M+G SP M  L  EI +VA S+  VLI G++GTGKELVA+AIH +S R+ 
Sbjct: 131 TPAVTASQFGMVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARAIHASSARSE 190

Query: 237 NPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQ 296
            PLV LNCAAL ES+ ESELFGH KGAFTGA   R G+F  AD GTLFLDEIG++S  +Q
Sbjct: 191 KPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISPMMQ 250

Query: 297 AKLLRVLQYGDIQRVGDDRCLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLSVP 356
            +LLR +Q  ++QRVG ++ + VDVR++AAT+RDL  EV AGRFR DL++RL+V  + VP
Sbjct: 251 VRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAAEVNAGRFRQDLYYRLNVVAIEVP 310

Query: 357 PLRERGDDVILLAGYFCEQCRLRQGLSRVVLSAGARNLLQHYSFPGNVRELEHAIHRAVV 416
            LR+R +D+ LLAG+F ++   R   +    +  A +LL HY +PGN+RELE+A+ RAVV
Sbjct: 311 SLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAVV 370

Query: 417 LARATRSGDEVILEAQHFAFPEVTLPTPEVAAVPV---VKQNLREATEAFQRETIRQALA 473
           L           L  ++ +  E+ L    +A+ P+     Q+++   E  ++E I  AL 
Sbjct: 371 L-----------LTGEYISERELPL---AIASTPIPLGQSQDIQPLVEV-EKEVILAALE 415

Query: 474 QNHHNWAACARML 486
           +   N    AR L
Sbjct: 416 KTGGNKTEAARQL 428