Pairwise Alignments

Query, 512 a.a., multidrug efflux system protein (NCBI) from Escherichia coli BW25113

Subject, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

 Score =  508 bits (1307), Expect = e-148
 Identities = 251/500 (50%), Positives = 344/500 (68%), Gaps = 4/500 (0%)

Query: 12  LVIMTIALSLATFMQVLDSTIANVAIPTIAGNLGSSLSQGTWVITSFGVANAISIPLTGW 71
           L++ TI LSLATFMQVLD+TIANVA+PTI+GNLG S  QGTWVITSF V+NAI++PLTGW
Sbjct: 14  LLLTTIGLSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGW 73

Query: 72  LAKRVGEVKLFLWSTIAFAIASWACGVSSSLNMLIFFRVIQGIVAGPLIPLSQSLLLNNY 131
           L++R GEVKLF+W+T+ F +AS+ CG++ S+  L+ FRV+QG+VAGPL P++Q+LL+  Y
Sbjct: 74  LSRRFGEVKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVY 133

Query: 132 PPAKRSIALALWSMTVIVAPICGPILGGYISDNYHWGWIFFINVPIGVAVVLMTLQTLRG 191
           PPAKR +ALAL +M  +VAPI GPILGG+I+D+Y W WIFFINVPIG+    +  Q +R 
Sbjct: 134 PPAKRGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQMRT 193

Query: 192 RETRTERRRIDAVGLALLVIGIGSLQIMLDRGKELDWFSSQEIIILTVVAVVAICFLIVW 251
           R   T R+ +D +GL  L+IG+G+LQ++LD+G +LDWF S  II+ ++++VV +   ++W
Sbjct: 194 RPVVTSRQPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAVFVIW 253

Query: 252 ELTDDNPIVDLSLFKSRNFTIGCLCISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASA 311
           ELTD +P+V+L LF  RNF IG + +   Y  +FG  ++LPQ LQ   GYTATWAGLA A
Sbjct: 254 ELTDRHPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVA 313

Query: 312 PVGIIPVILSPIIGRFAHKLDMRRLVTFSFIMYAVCFYWRAYTFEPGMDFGASAWPQFIQ 371
           P+G++PVI+SP +G++AH+ D+R L   +F+      Y RA  F   +DF   A  Q   
Sbjct: 314 PIGLLPVIMSPFVGKYAHRFDLRVLAGLAFLAIGTSCYMRA-GFTSEVDFQHVALVQLFM 372

Query: 372 GFAVACFFMPLTTITLSGLPPERLAAASSLSNFTRTLAGSIGTSITTTMWTNRESMHHAQ 431
           G  VA FFMP  +I LS LPP ++A  S L+ F RTL GS   S+TT +W  R   HHA 
Sbjct: 373 GIGVALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAASLTTWIWIRRADQHHAY 432

Query: 432 LTESVNPFNPNAQAMYSQLEGLGMTQQQASGWIAQQITNQGLIISANEIFWMSAGIFLVL 491
           L+E ++ F+P  +     LE LG    Q+   + Q +  Q  ++S  + F + + +F  L
Sbjct: 433 LSEHISQFDPTTR---HTLEQLGGASPQSYAQLEQILNGQAYMMSTVDYFTLMSWVFAGL 489

Query: 492 LGLVWFAKPPFGAGGGGGGA 511
           + LVWFAKPPF A  G   A
Sbjct: 490 ILLVWFAKPPFTAKAGPASA 509