Pairwise Alignments

Query, 512 a.a., multidrug efflux system protein (NCBI) from Escherichia coli BW25113

Subject, 509 a.a., Inner membrane component of tripartite multidrug resistance system from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  553 bits (1424), Expect = e-162
 Identities = 264/508 (51%), Positives = 369/508 (72%), Gaps = 1/508 (0%)

Query: 5   KPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNLGSSLSQGTWVITSFGVANAI 64
           +PL+GAQLV+ T+ALSLATFM VLD++IANV+IP IAG++G S +QGTWVITSF VANAI
Sbjct: 3   EPLKGAQLVLGTLALSLATFMNVLDTSIANVSIPAIAGDMGVSPAQGTWVITSFAVANAI 62

Query: 65  SIPLTGWLAKRVGEVKLFLWSTIAFAIASWACGVSSSLNMLIFFRVIQGIVAGPLIPLSQ 124
           S+PLTGWL +R G+V+LF  S + F +ASW CG++ ++ +LI FRV+QG+VAGP+IPLSQ
Sbjct: 63  SVPLTGWLTQRFGQVRLFTMSVLLFVVASWLCGLAPNIGLLIAFRVLQGLVAGPMIPLSQ 122

Query: 125 SLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGYISDNYHWGWIFFINVPIGVAVVLM 184
           +LLL +YP AK   A+A+W+MTV+VAP+ GP+LGG+I+DN  W WIF+IN+P+G+    +
Sbjct: 123 TLLLASYPRAKAGTAMAMWAMTVLVAPVAGPLLGGWITDNISWPWIFYINIPVGLVAAAL 182

Query: 185 TLQTLRGRETRTERRRIDAVGLALLVIGIGSLQIMLDRGKELDWFSSQEIIILTVVAVVA 244
           T    R R+    R  +D +GL LLV+ +G++QIM+D GKELDWF+S EII L VVAVV+
Sbjct: 183 TWSIYRSRDPGPRRVPLDVIGLVLLVLFVGAMQIMIDMGKELDWFASGEIIALAVVAVVS 242

Query: 245 ICFLIVWELTDDNPIVDLSLFKSRNFTIGCLCISLAYMLYFGAIVLLPQLLQEVYGYTAT 304
             F + WELTD +PIV++ LF  RNF  G L +S+AY L+FG +VLLP  LQ+  GYTAT
Sbjct: 243 FLFFLAWELTDKHPIVEIRLFARRNFVTGTLALSVAYGLFFGNVVLLPLWLQQHMGYTAT 302

Query: 305 WAGLASAPVGIIPVILSPIIGRFAHKLDMRRLVTFSFIMYAVCFYWRAYTFEPGMDFGAS 364
           WAGLA+APVG++ ++LSP +G+   ++D R+L T +FI + +  + R++ F    DF   
Sbjct: 303 WAGLATAPVGLLAIVLSPWVGKNVSRIDPRKLATVAFIGFGLVLWMRSH-FNTQADFMTI 361

Query: 365 AWPQFIQGFAVACFFMPLTTITLSGLPPERLAAASSLSNFTRTLAGSIGTSITTTMWTNR 424
             P  +QG A+A FF+PL  I  SGL P++  +A+ LSNF R  AG++GTS+ TT+W +R
Sbjct: 362 LIPTLLQGAAMAFFFIPLQAIVFSGLQPQQTPSAAGLSNFVRITAGAVGTSLFTTLWDSR 421

Query: 425 ESMHHAQLTESVNPFNPNAQAMYSQLEGLGMTQQQASGWIAQQITNQGLIISANEIFWMS 484
            S+HHAQL ES++  N  A A   QL G G++++QA   I + I  Q   ++  ++F++S
Sbjct: 422 ASLHHAQLVESIHTGNATAMATLDQLMGSGLSREQALANIDRMINQQAYTLAVTDLFYLS 481

Query: 485 AGIFLVLLGLVWFAKPPFGAGGGGGGAH 512
           A +F VL+ ++WF+KP  GA    GGAH
Sbjct: 482 AALFFVLVAVIWFSKPVLGAAVDAGGAH 509