Pairwise Alignments

Query, 512 a.a., multidrug efflux system protein (NCBI) from Escherichia coli BW25113

Subject, 512 a.a., putative multidrug efflux system from Escherichia coli BL21

 Score =  642 bits (1657), Expect = 0.0
 Identities = 313/503 (62%), Positives = 399/503 (79%)

Query: 6   PLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNLGSSLSQGTWVITSFGVANAIS 65
           PL G  L  +TIALSLATFMQ+LDSTI+NVAIPTI+G LG+S  +GTWVITSFGVANAI+
Sbjct: 10  PLTGGTLWCVTIALSLATFMQMLDSTISNVAIPTISGFLGASTDEGTWVITSFGVANAIA 69

Query: 66  IPLTGWLAKRVGEVKLFLWSTIAFAIASWACGVSSSLNMLIFFRVIQGIVAGPLIPLSQS 125
           IP+TG LA+R+GE++LFL S   F+++S  C +S++L++LIFFRV+QG++AGPLIPLSQS
Sbjct: 70  IPVTGRLAQRIGELRLFLLSVTFFSLSSLMCSLSTNLDVLIFFRVVQGLMAGPLIPLSQS 129

Query: 126 LLLNNYPPAKRSIALALWSMTVIVAPICGPILGGYISDNYHWGWIFFINVPIGVAVVLMT 185
           LLL NYPP KR+ ALALWSMTVI+APICGPILGGYI DN+ WGWIF INVP+G+ V+ + 
Sbjct: 130 LLLRNYPPEKRTFALALWSMTVIIAPICGPILGGYICDNFSWGWIFLINVPMGIVVLTLC 189

Query: 186 LQTLRGRETRTERRRIDAVGLALLVIGIGSLQIMLDRGKELDWFSSQEIIILTVVAVVAI 245
           L  L+GRET T   +++  GL LLV+G+G LQIMLD+G++LDWF+S  IIILTVV+V+++
Sbjct: 190 LTLLKGRETETSPVKMNLPGLTLLVLGVGGLQIMLDKGRDLDWFNSSTIIILTVVSVISL 249

Query: 246 CFLIVWELTDDNPIVDLSLFKSRNFTIGCLCISLAYMLYFGAIVLLPQLLQEVYGYTATW 305
             L++WE T +NPI+DLSLFKSRNFTIG + I+ AY+ Y GAIVL+PQLLQE  GY A W
Sbjct: 250 ISLVIWESTSENPILDLSLFKSRNFTIGIVSITCAYLFYSGAIVLMPQLLQETMGYNAIW 309

Query: 306 AGLASAPVGIIPVILSPIIGRFAHKLDMRRLVTFSFIMYAVCFYWRAYTFEPGMDFGASA 365
           AGLA AP+GI+P+++SP+IGR+ +K+DMR LVTFSF+MYAVC+YWR+ TF P +DF    
Sbjct: 310 AGLAYAPIGIMPLLISPLIGRYGNKIDMRVLVTFSFLMYAVCYYWRSVTFMPTIDFTGII 369

Query: 366 WPQFIQGFAVACFFMPLTTITLSGLPPERLAAASSLSNFTRTLAGSIGTSITTTMWTNRE 425
            PQF QGFAVACFF+PLTTI+ SGLP  + A ASS+SNF RTL+GS+GTS+T T+W  RE
Sbjct: 370 MPQFFQGFAVACFFLPLTTISFSGLPDNKFANASSMSNFFRTLSGSVGTSLTMTLWGRRE 429

Query: 426 SMHHAQLTESVNPFNPNAQAMYSQLEGLGMTQQQASGWIAQQITNQGLIISANEIFWMSA 485
           S+HH+QLT +++ FNP   +    ++    +       I  +IT Q L ISANEIF M+A
Sbjct: 430 SLHHSQLTATIDQFNPVFNSSSQIMDKYYGSLSGVLNEINNEITQQSLSISANEIFRMAA 489

Query: 486 GIFLVLLGLVWFAKPPFGAGGGG 508
             F++L  LVWFAKPPF A G G
Sbjct: 490 IAFILLTVLVWFAKPPFTAKGVG 512