Pairwise Alignments

Query, 390 a.a., multidrug efflux system (NCBI) from Escherichia coli BW25113

Subject, 431 a.a., Membrane fusion component of tripartite multidrug resistance system from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  298 bits (762), Expect = 3e-85
 Identities = 160/398 (40%), Positives = 243/398 (61%), Gaps = 16/398 (4%)

Query: 9   TPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGI--YWFLVLRHFEETDDAYVAGNQIQIMS 66
           TP       G   R   L  +  +++A  +G   YW LVL HFE TD+AYV GN +QI  
Sbjct: 3   TPSDNTAPQGNPARKKALTAVSAVVLAAGLGYAAYWALVLNHFETTDNAYVQGNLVQITP 62

Query: 67  QVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQ 126
           QV+G+V  + A++ D V+ G  LV LDPTDA+ A E+A+  LA +VR+   L  N++   
Sbjct: 63  QVAGTVVAINANDNDHVQAGQWLVRLDPTDAKIALEQAEAQLAQTVREVRTLYANNRTQG 122

Query: 127 ANIEVQKIALAKAQSDYNR-------RVPLGNANLIGREELQHA-------RDAVTSAQA 172
           A I +++  LA+AQ+D  R       R PL  +  +G+EE +HA       R +  +A+A
Sbjct: 123 AQIALREADLARAQADLQRLQDDVARRQPLVASGAVGQEEFKHATAQLAAARSSAEAARA 182

Query: 173 QLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRIISPMTGYVSRRAVQ 232
            +  A +Q  +NQ +  G  ++  P+V +A+  VR A++AL+R  + +P+ GYV+RR VQ
Sbjct: 183 AVLAAKEQLASNQTLTEGIAVDQHPSVLRASARVREAYVALKRVELQAPVAGYVARRNVQ 242

Query: 233 PGAQISPTTPLMAVVPATNMWVDANFKETQIANMRIGQPVTITTDIYGDDVKYTGKVVGL 292
            G ++   +PL++V+    +WVDANFKE+Q+ N+R+GQPV ++ D+YG +V Y G + GL
Sbjct: 243 LGQRVPAGSPLLSVIALDQVWVDANFKESQLKNLRLGQPVELSADVYGKNVTYHGTIEGL 302

Query: 293 DMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYPLRIGLSTLVSVNTTNRDG 352
             GTG+AF+LLPAQNATGNWIKVVQR+PVR+ LD K+L  +PLR+GLS    V+ +  DG
Sbjct: 303 GAGTGAAFALLPAQNATGNWIKVVQRVPVRVRLDAKELVDHPLRLGLSMEARVDVSKTDG 362

Query: 353 QVLANKVRSTPVAVSTAREISLAPVNKLIDDIVKANAG 390
           ++LA+   ++    +   E      +  +  I+  + G
Sbjct: 363 RMLADAAAASQEVQTAVFEQDNREADTRVQQIIGQHGG 400