Pairwise Alignments

Query, 245 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

Subject, 265 a.a., branched-chain amino acid ABC transporter permease from Ralstonia solanacearum UW163

 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 47/209 (22%), Positives = 84/209 (40%), Gaps = 14/209 (6%)

Query: 30  IPVAFAFGL-NATRLGFSPL---ESVFFSCIIYAGASQFVITAMLAAGSSLWIAALTVMA 85
           +P  F +GL     +  S L   +++  S ++YAG+SQ  +  +LAAG  +W   LT   
Sbjct: 36  VPPVFTWGLVTGVAMSKSVLTLPQAIGMSLLVYAGSSQLAVLPLLAAGLPVWTVLLTAFI 95

Query: 86  MDVRHVLYGPSLRSRIIQRLQKSKTALWAFGLTDEVFAAATAKLVRNN-RRWSENWMIGI 144
           ++VR +++   L       L   +  +  F   D  F     +       R  E +  G+
Sbjct: 96  VNVRFIIFSAGLVQH-FGHLPFGRRVMLGFINGDLPFVLFAQRFPGGGPERGKEGYFWGM 154

Query: 145 AFSSWSSWVFGTVIGAFSGSGLLQGYPAVEAALGFMLPALFMSFLLASFQRKQSLCVTAA 204
             S+W+ W   +V+G    S     +    A    ++P +  +        +    + A 
Sbjct: 155 TLSNWAVWQVSSVLGIVGASLFPDAWGLALAGTLALIPVMVSTI-------RSRATLMAV 207

Query: 205 LVGALAGVTLFSIPVAI-LAGIVCGCLTA 232
            V AL  +  F +P  + L   V G + A
Sbjct: 208 AVAALLALVAFKLPYRLSLVIAVVGAMAA 236