Pairwise Alignments

Query, 714 a.a., ribonucleotide-diphosphate reductase alpha subunit (NCBI) from Escherichia coli BW25113

Subject, 964 a.a., ribonucleoside-diphosphate reductase subunit alpha from Pseudomonas fluorescens SBW25

 Score =  212 bits (540), Expect = 6e-59
 Identities = 181/655 (27%), Positives = 302/655 (46%), Gaps = 84/655 (12%)

Query: 101 TFLGAWKFYTSYTLKTFDGKRYL--EDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQ 158
           T+LG    Y  Y +   DG R+   + F  RV M      +  E  A++  + + S  + 
Sbjct: 297 TYLGLQTLYDRYFIHK-DGIRFELPQVFFMRVAMGLAIEEKHKEDRAIEFYNLLSSFDYM 355

Query: 159 PATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG 218
            +TPT  N G   R +L SC+L  + D++  I  A++    LSK  GG+    + +R  G
Sbjct: 356 SSTPTLFNAGTL-RPQLSSCYLTTVPDDLSGIYHAIHDNAMLSKFAGGLGNDWTPVRALG 414

Query: 219 APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENAD 278
           + IK    +S GV+P +K++ D     NQ G R+GA   YL   H DI  F++ ++   D
Sbjct: 415 SYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHMDIEEFIELRKNTGD 474

Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVY---GKPFAD-----VAISQH 330
           ++ R   ++    IPD+      ++    LFSP +V  ++   GK F +      A+SQ+
Sbjct: 475 DRRRTHDMNTANWIPDLFMKRVFDDGPWTLFSPSEVPDLHDLTGKAFEERYEYYEALSQY 534

Query: 331 YDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLC 388
             ++   + I+     A+D ++++  + FE+G+P++ ++D  N  +P    G ++ SNLC
Sbjct: 535 PGKIKLFKTIQ-----AKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLC 589

Query: 389 SEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH-----TMDSPDFARTVETAVRGLT 443
           +EI    +  E               CNLGS+N+ +      +D+    RTV TAVR L 
Sbjct: 590 TEITLNTNKDEI------------AVCNLGSINLPNHIVNGKLDTAKLERTVNTAVRMLD 637

Query: 444 AVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITW 503
            V D+++  SVP  +  N     +GLG M     L  + I YGS  A++F +    A+++
Sbjct: 638 NVIDINYY-SVPQAQNSNFKHRPVGLGIMGFQDALYLQHIPYGSDAAVEFADKSMEAVSY 696

Query: 504 HALRTSMLLARERG--ETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLP 561
           +A++ S  LA ERG  ETF G   S ++ G       Q   + +  K  ++     +   
Sbjct: 697 YAIQASCDLADERGAYETFQG---SLWSKGILPLDSQQILIEQRGQKYIDVDLNESLD-- 751

Query: 562 TREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVY 621
               WA +R  V + GI N N+ A+ PT +I+ I   + SI P    + + K   +G   
Sbjct: 752 ----WAPVRARVQK-GIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYV-KSNLSGEFT 805

Query: 622 YPAPFMTNENLA-------------------------------LYQDAYEIGAEKIIDTY 650
              P++  +  A                               LY  A+E+  + I+D  
Sbjct: 806 VINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELKELYATAFEVDTKWIVDAA 865

Query: 651 AEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705
           +   + +DQ  SL L+    A+ + ++     AW +G+KT YY  LR +A   TE
Sbjct: 866 SRRQKWIDQAQSLNLYIAG-ASGKKLDVTYRMAWYRGLKTTYY--LRALAATSTE 917