Pairwise Alignments

Query, 332 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 325 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

 Score =  206 bits (523), Expect = 8e-58
 Identities = 116/290 (40%), Positives = 179/290 (61%), Gaps = 6/290 (2%)

Query: 30  LVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLIIISGEIDVSVGPMVAF 89
           L+V++IL     L +  F S+NN MNVLR  + +GI A  MT +I++G ID+SVG ++A 
Sbjct: 33  LIVVSIL---MGLASDNFFSVNNIMNVLRQVSVVGILAVGMTFVILTGGIDLSVGAVMAL 89

Query: 90  VSVCLAFLL-QFEVPLAVACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALRGMG 148
           V    A L+    +  A+A    L +G  +G   G L     +P+ + TL      RG+G
Sbjct: 90  VGTLSAGLMVNTGLSPAIALPAGLFIGLGIGIFNGALVAWGRMPAIIVTLATMGMARGLG 149

Query: 149 LFMTNALPVPIDENEVLDWLGGQFLG-VPVSALIMIVLFALFVFISRKTAFGRSVFAVGG 207
           L  +   PV    + +  W G   +G VPV  +IM+V++A+   + ++TAFGR V+A+GG
Sbjct: 150 LIYSGGYPVSGIPSWI-SWFGVGRVGIVPVPVIIMVVIYAVAWVLLQRTAFGRHVYALGG 208

Query: 208 NATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLGSGNAGAANGLEFDVIAAVVVG 267
           N  AA+L G+  RRV++ ++ +SG+ AA   ++L  RL SG   A  G E D IAAVV+G
Sbjct: 209 NELAARLSGVKTRRVKLAVYGISGVTAAFAALILTGRLMSGQPNAGVGFELDAIAAVVLG 268

Query: 268 GTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQVVRGVIIVVAV 317
           GTA++GGRG + GTL+G +++ ++ NGL L+GIN + Q V++G II++A+
Sbjct: 269 GTAIAGGRGLILGTLIGAVLLGILNNGLNLMGINPYLQDVIKGGIILLAI 318