Pairwise Alignments

Query, 426 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 421 a.a., stationary phase inducible protein CsiE from Serratia liquefaciens MT49

 Score =  317 bits (812), Expect = 4e-91
 Identities = 174/423 (41%), Positives = 245/423 (57%), Gaps = 9/423 (2%)

Query: 6   APPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLT 65
           +P   LS  QRRC +LL L+ P     + T S++NGV   I   DI+E   EI R+H L 
Sbjct: 6   SPVPELSGQQRRCHLLLMLYAPVPAVQLETISQINGVAPLITRQDIAEVASEIQRFHHLE 65

Query: 66  LTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYD 125
           +    D  YR+ G+ LNQRLCL HWLRR  R  P F+   F     S+  ++ + R    
Sbjct: 66  IDGNPDEGYRIRGSALNQRLCLIHWLRRALRCSPEFVEHHF-----SQWLQQALGRGAEL 120

Query: 126 DTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEF 185
              L+  +  C   L + F+ RD  FL  YL++C+ ++     P F P Q  W     E+
Sbjct: 121 TPELEQCIGECEALLNRSFDRRDRQFLQHYLRFCVWENQRQRHPVFTPAQHDWLHQKPEY 180

Query: 186 QVAQEIGRHWQRRALQPVPP--DEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVN 243
           Q A  +  H     L  +PP  +E  F+ L F+ML+      +    D +L  +IK +V+
Sbjct: 181 QAATLL--HHSLNQLFTLPPVANESDFLVLTFTMLKNHSYHSNDSAEDLRLMAAIKNMVD 238

Query: 244 HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAAL 303
            F+++  + F  E+ L  QL+ HLA A+ R  F IGIDN L EE  R YPRL+RT + AL
Sbjct: 239 RFQQISGMTFSSEEDLISQLFAHLAPAVERCRFEIGIDNQLLEEVERKYPRLMRTAQEAL 298

Query: 304 AGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELT 363
           A  E EY +H S EE+GLVA+ FGAWLMQ N L EKQ++LLT ++ + E Q+E Q+RELT
Sbjct: 299 APLEQEYDIHFSSEEAGLVAISFGAWLMQGNALQEKQVLLLTLDNPQLEEQVEYQIRELT 358

Query: 364 LLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKML 423
           LLPLNIK++ ++ +L++GAP+G  L+I PY        PPLIYT+L L   Q++ IR +L
Sbjct: 359 LLPLNIKYLPLRDYLRSGAPQGITLVITPYAAEHTESEPPLIYTELPLERQQRKAIRALL 418

Query: 424 ESA 426
           E++
Sbjct: 419 ETS 421