Pairwise Alignments

Query, 770 a.a., fused transglycosylase/transpeptidase (NCBI) from Escherichia coli BW25113

Subject, 842 a.a., penicillin-binding protein 1A from Rhodanobacter sp000427505 FW510-R12

 Score =  119 bits (298), Expect = 7e-31
 Identities = 93/261 (35%), Positives = 134/261 (51%), Gaps = 20/261 (7%)

Query: 41  PARVVVAQDGTPLWRFADADGIWRYPVTIEDVSPRYLEALINYEDRWFWKHPGVNPFSVA 100
           P RV+ A DG  +  F +     R PV I  V  R   A+++ ED  F+ HPGV+   +A
Sbjct: 51  PLRVLSA-DGKLIASFGETR---RIPVDIGKVPDRLKHAVLSAEDADFYHHPGVDWHGIA 106

Query: 101 RAAWQDL-TSGRVISGGSTLTMQVAR--LLDPHPKTFGGKIRQLWRALQLEWHLSKREIL 157
           RA W  L T G    GGST+T QVAR   L P  K +  K+ +++ AL++E  LSK +IL
Sbjct: 107 RAGWHVLVTGGDKGPGGSTITQQVARNFFLSPE-KLYSRKLTEIFIALRIEHELSKDQIL 165

Query: 158 TLYLNRAPFGGTLQGIGAASWAYLGKSPANLSYSEAAMLAVLPQAPSRLRPDRWPERAEA 217
            LYLN+   G    G+ AA+  Y GK+   L+ +E A++A   Q PS + P   P+RA A
Sbjct: 166 ELYLNKMFLGHRSYGVAAAAEYYYGKTLDQLTVAECALIASTFQLPSAVNPINSPKRAIA 225

Query: 218 ARNKVLERMAVQGVWSREQVKESREEPIWLAPRQM------PQLAPLFSRMMLGKSKSDK 271
            RN VL  M      ++   +++  EP    P +       P LA +  R +L +  +D 
Sbjct: 226 RRNWVLGEMLRHDYITKAVYEQAIAEPNRAYPHEQPIEVDAPYLAEMVRRQVLDRFGNDA 285

Query: 272 IT------TTLDAGLQRRLEE 286
           +T      TTL +G Q+   E
Sbjct: 286 LTEGYVVRTTLQSGRQQAAVE 306



 Score = 75.1 bits (183), Expect = 1e-17
 Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 14/176 (7%)

Query: 291 WKGRLPPRSSLAMIVVDHTDMRVRGWVGSVDLNDDSRFGHVDMVNSIRSPGSVLKPFVYG 350
           W+    P +  A+  V   D  ++  VG  +    S+F    M  + R PGS  KP++Y 
Sbjct: 421 WQLAQIPAAQAALASVAPEDGSIQALVGGFNFVR-SKFNRAVM--AARQPGSSFKPYLYS 477

Query: 351 LALDEGLIHPASLLQDVP-------RRTGDYRPGNFDSGFHGPISMSEALVRSLNLPAVQ 403
            A + G   PAS++ D P       R  G + P N D  F GP+ + EALV+S NL +V+
Sbjct: 478 AAFERGFT-PASIINDAPLALPDPSRPNGIWTPSNDDDKFAGPMRLREALVQSKNLVSVR 536

Query: 404 VLEAYGPKRFAAKLRNVGLPLYLPNGAAPNLSLILGGAGAKLEDMAAAYTAFARHG 459
           +L+A G +         G   +  +    NLS+ LG A      MA  Y  FA  G
Sbjct: 537 LLDAVGVRYMREYATRFG---FSQDAMPANLSMALGTASVSPMGMARGYAVFANGG 589



 Score = 41.6 bits (96), Expect = 2e-07
 Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 3/76 (3%)

Query: 508 LAWKTGTSYGYRDAWAIGVNARYVIGIWTGRPDGTPV-VGQFGFASAVPL-LNQVNNILL 565
           LA KTG++  +RDAW +G +      +W G  D + +  G+FG  +A+P+ ++ + ++L 
Sbjct: 718 LAGKTGSTNDHRDAWFVGFDGELSTAVWVGFDDYSSLGRGEFGAKAALPIWMSYMGSVLK 777

Query: 566 SR-SANLPEDPRPNSV 580
            + S+ LP  P  ++V
Sbjct: 778 GQPSSTLPMPPGISTV 793