Pairwise Alignments

Query, 770 a.a., fused transglycosylase/transpeptidase (NCBI) from Escherichia coli BW25113

Subject, 817 a.a., penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase from Pseudomonas putida KT2440

 Score =  129 bits (324), Expect = 6e-34
 Identities = 86/250 (34%), Positives = 139/250 (55%), Gaps = 16/250 (6%)

Query: 45  VVAQDGTPLWRFADADGIWRYPVTIEDVSPRYLEALINYEDRWFWKHPGVNPFSVARAAW 104
           V + DG  +  F +   + R P+   ++ P++++AL++ ED  F  H GV+P S+ RAA 
Sbjct: 51  VYSSDGKLIAEFGE---MRRSPIRFAEIPPQFIQALLSAEDDNFLNHYGVDPSSLMRAAT 107

Query: 105 QDLTSGRVISGGSTLTMQVAR-LLDPHPKTFGGKIRQLWRALQLEWHLSKREILTLYLNR 163
           Q + +G + +GGST+TMQVA+       ++F  K  ++  ALQ+E  L+K EIL LY+N+
Sbjct: 108 QLVKTGHIQTGGSTITMQVAKNFFLTSERSFSRKTNEILLALQIERELTKDEILELYVNK 167

Query: 164 APFGGTLQGIGAASWAYLGKSPANLSYSEAAMLAVLPQAPSRLRPDRWPERAEAARNKVL 223
              G    GI AA+  Y GKS  ++S ++ AM+A LP+APSR  P   P RA+  R+ +L
Sbjct: 168 IYLGNRAYGIDAAAQVYYGKSIRDVSLAQMAMIAGLPKAPSRFNPLANPVRAKERRDWIL 227

Query: 224 ERMAVQGVWSREQVKESREEPI---WLAPR---QMPQLAPLFSRMMLGKSKSD------K 271
            RM   G   +   + +  EP+   +  P      P +A +    M+G+  SD      +
Sbjct: 228 GRMYKLGKIDQASYEAALAEPLNASYHVPTPEVNAPYIAEMARAEMVGRYGSDAYTEGFR 287

Query: 272 ITTTLDAGLQ 281
           +TTT+ + +Q
Sbjct: 288 VTTTVPSDMQ 297



 Score = 86.7 bits (213), Expect = 5e-21
 Identities = 91/345 (26%), Positives = 142/345 (41%), Gaps = 74/345 (21%)

Query: 297 PRSSLAMIVVDHTDMRVRGWVGSVDLNDDSRFGHVDMVNSIRSPGSVLKPFVYGLALDEG 356
           P +  A++ +D  +  +R  VG     + S +     V + R PGS  KPF+Y  ALD G
Sbjct: 420 PVAQSALVTLDPNNGAIRALVGGFSF-EQSNYNRA--VQAKRQPGSSFKPFIYSAALDSG 476

Query: 357 LIHPASLLQDVPRRTGD------YRPGNFDSGFHGPISMSEALVRSLNLPAVQVLEAYGP 410
               +SL+ D P    D      +RP N  + F GPI M EAL +S NL ++++L+A G 
Sbjct: 477 YT-ASSLVNDAPIVFVDESVDKVWRPKNDTNTFLGPIRMREALYKSRNLVSIRLLQAMGV 535

Query: 411 KRFAAKLRNVGLPLYLPNGAAPNLSLILGGAGAKLEDMAAAYTAFARHG-KAGKLRLQPD 469
            R    +   G   +       NLSL LG A     ++A  ++ FA  G K     ++  
Sbjct: 536 DRTIDYIAKFG---FNKQDLPRNLSLALGTATLTPMEIATGWSTFANGGYKITPYLIERI 592

Query: 470 DPLLERPLMSSGAAWIIRRI-----MADEAQPLPDSALPRVAP----------------- 507
           +      L ++  A + +       +A   QP+  +A+P  AP                 
Sbjct: 593 ESRSGETLFTANPARVPQGAQDQAGLAAPEQPISTAAMPGEAPSAFSQVAAASQAPAVAE 652

Query: 508 ----------------------------------LAWKTGTSYGYRDAWAIGVNARYVIG 533
                                             LA KTGT+   +DAW  G NA YV  
Sbjct: 653 QIIDGRTTYILTSMLQDVIKRGTGRRALALGRTDLAGKTGTTNESKDAWFSGYNADYVTT 712

Query: 534 IWTGRPDGTPVVG--QFGFASAVPL-LNQVNNILLSRSANLPEDP 575
           +W G  D    +G  ++G  +A+P+ +N +   L  + A+ P +P
Sbjct: 713 VWVGF-DQPETLGRREYGGTAALPIWMNFMGAALKDKPAHAPAEP 756