Pairwise Alignments

Query, 372 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (NCBI) from Escherichia coli BW25113

Subject, 424 a.a., (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (EC 1.17.7.3) from Variovorax sp. SCN45

 Score =  175 bits (443), Expect = 2e-48
 Identities = 123/377 (32%), Positives = 194/377 (51%), Gaps = 52/377 (13%)

Query: 20  VPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVRVSVPTMDAAEAFKLIKQQ- 78
           V +G  AP+ VQSMTNT T D   T  Q+K L   G+++VR++V T +AA     I++Q 
Sbjct: 30  VTVGGDAPVRVQSMTNTDTVDAIGTAIQVKELALAGSEMVRITVNTPEAAAQVPYIREQL 89

Query: 79  ----VNVPLVADIHFDYRIALKVAEYGVDCL---RINPGNIGN----EERIRMVVDCARD 127
               V+VPL+ D H++    L       + L   RINPGN+G     +++   ++D A  
Sbjct: 90  DRMGVDVPLIGDFHYNGHRLLTDYPACAEALSKYRINPGNVGKGDKKDKQFGQMIDAAMR 149

Query: 128 KNIPIRIGVNAGSLEKDLQEKYGEPTPQ-------------ALLESAMRHVDHLDRLNF- 173
            N P+RIGVN GSL+++L     +   Q             AL+ SA+      + +   
Sbjct: 150 WNKPVRIGVNWGSLDQELLASLMDTNSQRAQPWDAKQVMYEALITSAIESAKLAESMGMA 209

Query: 174 -DQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGI 232
            +Q  +S K S V   +  YR LA++ + PLHLG+TEAG    G V SA  L +LL EGI
Sbjct: 210 GNQVILSCKVSGVQDLISVYRELARRCEYPLHLGLTEAGMGTKGTVASATALSILLQEGI 269

Query: 233 GDTLRVSLAADP----VEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALE 288
           GDT+RVSL   P     +E+ +  +IL++L +R    +  ACP C R       T   L 
Sbjct: 270 GDTIRVSLTPQPGESRTQEVLIANEILQALGLRVFVPSVTACPGCGR---TTSTTFQELA 326

Query: 289 QRLEDI--------------ITPMDVSIIGCVVNGPGEALVSTLGV----TGGNKKSGLY 330
           ++++D               +  + V+++GC+VNGPGE+  + +G+    TG    + ++
Sbjct: 327 KQIDDYLRMQMPVWRKKYPGVETLKVAVMGCIVNGPGESKHADIGISLPGTGEAPAAPVF 386

Query: 331 EDGVRKDRLDNNDMIDQ 347
            DG +   L  +++ ++
Sbjct: 387 IDGEKALTLRGDNIANE 403