Pairwise Alignments

Query, 372 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (NCBI) from Escherichia coli BW25113

Subject, 437 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Paraburkholderia sabiae LMG 24235

 Score =  185 bits (469), Expect = 2e-51
 Identities = 136/400 (34%), Positives = 205/400 (51%), Gaps = 62/400 (15%)

Query: 5   APIQRRKSTRIYVGN--VPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVRVS 62
           AP +R  +  +  G   V IG  AP+ VQSMTNT T D   T  QIK L + G+++VR++
Sbjct: 23  APRRRSHAVDVRWGGQLVTIGGDAPVRVQSMTNTDTADAIGTAIQIKELAQAGSELVRIT 82

Query: 63  VPTMDAAEAFKLIKQQ-----VNVPLVADIHFDYRIALKVAEYGVDCL---RINPGNIGN 114
           V T +AA A   +++Q     V VPLV D H++  + L+      + L   RINPGN+G 
Sbjct: 83  VNTPEAAAAVPAVREQLDRMGVTVPLVGDFHYNGHLLLRDYPGCAESLSKYRINPGNVGQ 142

Query: 115 ----EERIRMVVDCARDKNIPIRIGVNAGSLEKDLQEKY-------GEPTP------QAL 157
               + +   +++ A   + P+RIGVN GSL++DL  K         EP        +AL
Sbjct: 143 GAKRDTQFAQMIEAAAKYDKPVRIGVNWGSLDQDLLAKMMDENAARAEPWEAQSVMYEAL 202

Query: 158 LESAMRHVDHLDRLNFDQFKV--SVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARS 215
           ++SA+   +    L   + K+  S K S V   +  Y+ LAK+ D  LHLG+TEAG    
Sbjct: 203 IQSAIGSAERAVELGLGRDKIILSCKVSGVQDLIAVYQELAKRCDFALHLGLTEAGMGSK 262

Query: 216 GAVKSAIGLGLLLSEGIGDTLRVSLAADP----VEEIKVGFDILKSLRIRSRGINFIACP 271
           G V S   L +LL +GIGDT+R+SL  +P      E+ VG +IL+++ +RS     IACP
Sbjct: 263 GIVASTAALSVLLQQGIGDTIRISLTPEPGASRTGEVIVGQEILQTMGLRSFTPMVIACP 322

Query: 272 TCSRQEFDVIGTVNALEQRLEDII------------------TPMDVSIIGCVVNGPGEA 313
            C R       T + L Q L   I                    M V+++GC+VNGPGE+
Sbjct: 323 GCGR-------TTSTLFQELASQIQTYLRTQMPMWRDTYPGVEKMHVAVMGCIVNGPGES 375

Query: 314 LVSTLGV----TGGNKKSGLYEDGVRKDRLDNNDMIDQLE 349
             + +G+    +G N  + ++ DGV+   L   ++  + +
Sbjct: 376 KHANIGISLPGSGENPAAPVFIDGVKVKTLRGENIAQEFQ 415