Pairwise Alignments

Query, 372 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (NCBI) from Escherichia coli BW25113

Subject, 370 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Magnetospirillum magneticum AMB-1

 Score =  385 bits (989), Expect = e-111
 Identities = 195/359 (54%), Positives = 261/359 (72%), Gaps = 1/359 (0%)

Query: 7   IQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVRVSVPTM 66
           I RRKS +I+VG+V +G  API+VQ+MTNT TTD++ T+ QI+     GAD+VRVS P  
Sbjct: 9   IVRRKSRQIHVGSVAVGGDAPISVQTMTNTLTTDIKGTLEQIRRAADAGADLVRVSCPDE 68

Query: 67  DAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRMVVDCAR 126
           D+ +AFK I ++  VPL+ADIHF Y+  ++ AE G  CLRINPGNIG+ ER+R VV  A+
Sbjct: 69  DSTKAFKTIAKESPVPLIADIHFHYKRGIEAAEAGAACLRINPGNIGSHERVREVVKAAK 128

Query: 127 DKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSVKASDVF 186
           D    +RIGVNAGSL+K L +KYGEP P AL+ESA+ H   L+  +F +FK++VKASDVF
Sbjct: 129 DYGCSMRIGVNAGSLDKHLLDKYGEPCPDALVESALEHAKLLEDNDFFEFKIAVKASDVF 188

Query: 187 LAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRVSLAADPVE 246
           LAV +Y+ LAK  D PLHLGITEAGG   G VKSAIG+G LL +GIGDTLRVSL+AD  E
Sbjct: 189 LAVAAYQGLAKACDYPLHLGITEAGGLIGGTVKSAIGIGSLLWQGIGDTLRVSLSADVTE 248

Query: 247 EIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDVSIIGCV 306
           E+KVGF++LK+L +R RG+  ++CP+C+RQ FDVI TV  LE RL  +  P+ +SI+GCV
Sbjct: 249 EVKVGFEMLKTLDLRHRGVRIVSCPSCARQGFDVIKTVETLENRLSHVRAPVTLSILGCV 308

Query: 307 VNGPGEALVSTLGVTGGNKKS-GLYEDGVRKDRLDNNDMIDQLEARIRAKASQLDEARR 364
           VNGPGEA  + +G+TGG   S  +Y  G     +D   M+D +   + A+A++++ A++
Sbjct: 309 VNGPGEARETMVGITGGGADSHKVYIGGSPDHNVDGKTMVDHIVELVEARAAEIEAAKQ 367