Pairwise Alignments

Query, 205 a.a., hydrogenase 4 Fe-S subunit (VIMSS) from Escherichia coli BW25113

Subject, 162 a.a., putative 4Fe-4S ferredoxin-type oxidoreductase subunit from Escherichia coli BL21

 Score =  126 bits (317), Expect = 2e-34
 Identities = 74/202 (36%), Positives = 99/202 (49%), Gaps = 44/202 (21%)

Query: 1   MNRFVVAEPLWCTGCNTCLAACSDVHKT-QGLQQH---PRLALAKTSTITAPVVCHHCEE 56
           M   ++  P  C GC TC  AC   H + Q L      PRL + +  +I+APV+CH CE 
Sbjct: 1   MKSLIIVNPADCIGCRTCEVACVVAHPSEQELNADVFLPRLKVQRLDSISAPVMCHQCEN 60

Query: 57  APCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAISASGSRPVNAHAQYVFQAE 116
           APC+  CPV A++  +  +Q N + CIGC+ C   CPFG I+   S P +   Q      
Sbjct: 61  APCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQ-SLPGDTRQQ------ 113

Query: 117 GSLKDGEENAPTQHALLRWEPGVQTVAVKCDLCDFLPEGPACVRACPNQALRLITGDSLQ 176
                                      VKCDLC+   EGPACV +CP QAL+L+T   L+
Sbjct: 114 --------------------------IVKCDLCEQREEGPACVESCPTQALQLLTERELR 147

Query: 177 RQMKEKQRLAASWFANGGEDPL 198
           R    +QR+ AS     GE+PL
Sbjct: 148 R--VRQQRIVAS-----GENPL 162