Pairwise Alignments

Query, 565 a.a., predicted sensory kinase in two-component system with YpdB (NCBI) from Escherichia coli BW25113

Subject, 561 a.a., sensor histidine kinase from Serratia liquefaciens MT49

 Score =  233 bits (593), Expect = 2e-65
 Identities = 160/561 (28%), Positives = 293/561 (52%), Gaps = 38/561 (6%)

Query: 5   FNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGV 64
           F+ +L +  +  + L+  + L +  LF  L   +   P +LL    IFS+F +  T+ G+
Sbjct: 4   FSQVLLLLQQMCVYLVIAYLLSKTPLFIPLTQVTIRLPHKLLCYV-IFSVFCIMGTYFGL 62

Query: 65  PVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCI 124
            VEGS+ N R I  + GG+L GP VG + G+  G+HRY +  GG+T I C ++++  G +
Sbjct: 63  HVEGSIANTRAIGAVLGGLLGGPSVGFLVGLTGGLHRYTL--GGMTDIACAVSTVAEGLV 120

Query: 125 SGWINLKIPKAQR--------WRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIP 176
            G ++    + +R        +  G+   ++ E L M +++  A      + +V  I +P
Sbjct: 121 GGLVHSIAMRRRRIDLLFNPLFVAGV--ALVTEVLQMAIILAIARPFDEALRLVEHIALP 178

Query: 177 MILGSV--CIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCE 233
           M++ +      F+ +L+      ++ + A  AK AL IA +T  + R   + E+  +V  
Sbjct: 179 MLIANTLGAAMFMQILLDRRAMFEKYTGAFSAK-ALKIAERTEGILRQGFDQENSMRVAR 237

Query: 234 IIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHR 293
           ++  ++   AVAIT+ + +LA++G+G+ ++  G    S  + +A++  +++  + +E   
Sbjct: 238 VLYQELGIGAVAITDREKLLAFIGIGDDHHLPGTPISSKHSHRAIDNNEVVYADGNELSY 297

Query: 294 TPEIH------SMLVIPL-WEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEV 346
           +  I+      S LVIPL  E   V GT+K+Y   +   ++  + +  G++ ++S Q+  
Sbjct: 298 SCSINANCKLGSTLVIPLRGENQRVIGTIKLYEPKSRLFSTINRTLGEGIANLLSAQIMA 357

Query: 347 SRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNI 406
            + E+  ++  ++E++ L +++NPHFLFNALN + + IR + D A +L+  LS + R N+
Sbjct: 358 GQYERHTQLLAQSEIKLLHAQVNPHFLFNALNTLVAVIRRDGDRACELVQYLSTFFRKNL 417

Query: 407 ELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCC-IPSLLIQPLVENAI 465
           +  DDE + +  EL  +  Y+ IEQARF D+L +   + EE+    +P+  +QP+VENAI
Sbjct: 418 KRSDDE-VSLADELEHVNAYLQIEQARFADRLEIAVSLPEELLAVRLPAFSLQPIVENAI 476

Query: 466 VHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNK-IGLLNVH 524
            HG     G G + I        + + V D      P          +P N  +G+  V 
Sbjct: 477 KHGTSQLLGIGRIDIGARLEDGCLLLQVTDNAGLYQP----------LPNNSGLGMNLVD 526

Query: 525 HRVKLLYGEGLHIR-RLEPGT 544
            R+++ YG+G  +R   EP T
Sbjct: 527 KRIRVRYGDGYGVRVACEPQT 547