Pairwise Alignments

Query, 1197 a.a., hybrid sensory histidine kinase in two-component regulatory system with EvgA (NCBI) from Escherichia coli BW25113

Subject, 1166 a.a., hypothetical protein from Pseudomonas sp. S08-1

 Score =  265 bits (676), Expect = 2e-74
 Identities = 222/802 (27%), Positives = 374/802 (46%), Gaps = 43/802 (5%)

Query: 288  LELTEHEKQWIKQHPNLKV-LENPYSPPYSMTDENGSVRGVMGDILNIITLQTGLNFSPI 346
            L+L E ++ W+++HP L+V +E    PP+ + DE G  RG+ GD L ++  + G+   P+
Sbjct: 21   LQLDEADRAWLREHPVLRVGIERSGWPPFDVIDEQGRHRGLSGDYLALLAERLGVRLEPV 80

Query: 347  TVSHNIHAGTQLSPGGWDIIPGAIYSEDRENNVLFAEAF-ITTPYVFVMQKAPDSEQTLK 405
             V     A   L     D++P    + +RE ++ F+E + +++  +F  ++         
Sbjct: 81   LVEDWDAALAALRDDRVDLLPSVARTPEREMSMAFSEPYLVSSSLIFTREEVDVQRIGSL 140

Query: 406  KGMKVAIPYYYELHSQLKEMYPEVEWIQVDNASAAFHKVKEGELDALVATQLNSRYMIDH 465
             G +VAI   Y L   L+E  PEV  I+V +  AA   V  G  DA V   + + Y+I  
Sbjct: 141  AGKRVAIERGYVLQQGLREAVPEVRIIEVRDTEAALRAVSSGRADAYVGDMIVASYLIRE 200

Query: 466  YYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPPSEVLRLTEKWIKMPNVT 525
                 L      G+  +   FA  R  P+L  +++KAL ++   E   + E+W+  P   
Sbjct: 201  LNLTNLELRGETGLSTSEFRFAARRTNPQLIALLDKALASLSDEEQEAIKERWLP-PLTA 259

Query: 526  IDTWDLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKVIQGDLENQISFRKALSDSL 585
             +   L    +  +  L V L+   L+W   L   +  R+  + + + Q S   AL +++
Sbjct: 260  FNLRRLLQVGWPYLVGL-VALIAFVLVWNRRLAVQITERQRAEAEAQRQRSTLLALINAI 318

Query: 586  PNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLENSDSPFKDVFSNAHEVTAETKEN 645
            P+P +  + +G  +  N A    F   +  + ++   +++      F       A  + +
Sbjct: 319  PDPIWFKDAKGRYMGINQACAELFGKSH--DEVVGRRDTE------FLAPAWAAARAEHD 370

Query: 646  RTI--YTQVFEIDNGIE----KRCINHWHTLCNLPASDNAVY---ICGWQDITETRDLIN 696
            RT   +   FE +  +     ++ +  + TL      D       +   +DIT  +    
Sbjct: 371  RTAMNWPHPFESEGQVTYPDGRQVV--FDTLRTTFRDDQGKLLGLVGVSRDITVRKQTEA 428

Query: 697  ALEVEKNKAIKATVAKSQFLATMSHEIRTPISSIMGFLELLSGSGLSKEQRVEAISLAYA 756
             L   K  A +A   KS FLA MSHEIRTP+++I+G   L   + L+  QR + +S    
Sbjct: 429  ELAKAKELAEEAARLKSDFLANMSHEIRTPMNAIIGMSHLAMKTDLNPRQR-DYLSKIQQ 487

Query: 757  TGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFGAIAASKSIAL--SCSS 814
             GQ LLG+I +ILD  KIE+G   ++    D+  +++N     G     K + L  +   
Sbjct: 488  AGQHLLGIINDILDFSKIEAGKLTIERIDFDLQQVLENLAGLIGDKVGGKGLELVFNLDP 547

Query: 815  TFPEHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLGHIDDNHAVIKMTIMDSGS 874
              P+H +   DP    Q+L N  +NA+KFT +G V++         +  ++ M + D+G 
Sbjct: 548  ELPQHLVG--DPLRLGQILINYANNAVKFTEQGEVEVILRAEQRSADSLLLYMGVRDTGI 605

Query: 875  GLSQEEQQQLFKRYSQ--TSAGRQQTGSGLGLMICKELIKNMQGDLSLESHPGIGTTFTI 932
            GL+ E++ +LF+ + Q  TS  R+  G+GLGL ICK L + M G + +ES  G G+ F  
Sbjct: 606  GLTAEQRGRLFESFQQADTSTTRKYGGTGLGLAICKSLAEAMGGHVGVESEVGRGSLFWC 665

Query: 933  TIPVEIS-QQVATVEAKAEQPITLPEKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDG 991
             +P+ I+ +Q   + A+A+          +L+ DD+ + R +L   L  + + VD    G
Sbjct: 666  RVPLGIAGEQGPRLLAQADL-----RGRRVLVVDDNHSARQVLSGMLESMSFRVDAVDSG 720

Query: 992  VQALHKVS-----MQHYDLLITDVNMPNMDGFELTRKLREQNSSLPIWGLTANAQANERE 1046
              AL +V       + ++LL+ D  MP MDG EL RK+ E     P   L A A   E  
Sbjct: 721  KLALQRVQEAVLRREPFELLVLDWQMPGMDGLELARKVAELGLQPPPHLLMATAFGREEV 780

Query: 1047 --KGLSCGMNLCLFKPLTLDVL 1066
                   G+   L KPL   +L
Sbjct: 781  LLGAERAGIEDVLLKPLNPSLL 802



 Score = 71.2 bits (173), Expect = 5e-16
 Identities = 54/235 (22%), Positives = 105/235 (44%), Gaps = 1/235 (0%)

Query: 42  LRLSNKELRWLASKKNLVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLTLR 101
           L+L   +  WL     L + + +S        D Q R RG++ DYL LL   L ++L   
Sbjct: 21  LQLDEADRAWLREHPVLRVGIERSGWPPFDVIDEQGRHRGLSGDYLALLAERLGVRLEPV 80

Query: 102 EYADHQKAMDALAEGEVDIVLSHLVTSPPLNNDIAATKPLIITFPALVTTLHDSMRPLTS 161
              D   A+ AL +  VD+ L  +  +P     +A ++P +++   + T     ++ + S
Sbjct: 81  LVEDWDAALAALRDDRVDL-LPSVARTPEREMSMAFSEPYLVSSSLIFTREEVDVQRIGS 139

Query: 162 PKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGHNDYFIGSNIITSSMIS 221
                +A    Y   + + ++ P+  II   +   AL +VS+G  D ++G  I+ S +I 
Sbjct: 140 LAGKRVAIERGYVLQQGLREAVPEVRIIEVRDTEAALRAVSSGRADAYVGDMIVASYLIR 199

Query: 222 RYFTHSLNVVKYYNSPRQYNFFLTRKESVILNEVLNRFVDALTNEVRYEVSQNWL 276
                +L +            F  R+ +  L  +L++ + +L++E +  + + WL
Sbjct: 200 ELNLTNLELRGETGLSTSEFRFAARRTNPQLIALLDKALASLSDEEQEAIKERWL 254



 Score = 61.6 bits (148), Expect = 4e-13
 Identities = 62/241 (25%), Positives = 102/241 (42%), Gaps = 17/241 (7%)

Query: 961  ILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSMQ---HYDLLITDVNMPNMDG 1017
            +L+ +D+  NR +    L   G  +D+A  G  AL  +      HY L++ D+ MP +DG
Sbjct: 836  VLLVEDNELNREVACGLLQESGLQIDQAEHGQIALDMLQAAADGHYALVLMDMQMPVLDG 895

Query: 1018 FELTRKLREQN--SSLPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQL-- 1073
               T+ LR +   ++LPI  +TANA   +RE+ L+ GMN  L KP+    L   L +   
Sbjct: 896  IATTQALRREPRFAALPIVAMTANAMPADRERCLAAGMNDHLGKPIEPGELWVTLGRWLR 955

Query: 1074 ---HQVAHIAP------QYRHLDIEALKNNTANDLQLMQEILMTFQHETHKDLPAAFQAL 1124
                  A +A       Q   +D+           +L + +L  F            QAL
Sbjct: 956  ASEKPTAAVAQAGLPDWQLPGVDLANGLRRVLGKPELYRRLLDKFAASQADCATRLRQAL 1015

Query: 1125 EAGDNRTFHQCIHRIHGAANILNLQKLINISHQLEITPVSDDSKPEILQLLNSVKEHIAE 1184
             AG+  +  +  H + G A  L    L   +  +E + + D    E+   L  ++  +  
Sbjct: 1016 AAGEQESAEREAHSLKGLAGNLGALDLATQAAAIE-SAIKDARHDELEAQLGELERSLTA 1074

Query: 1185 L 1185
            L
Sbjct: 1075 L 1075