Pairwise Alignments

Query, 1197 a.a., hybrid sensory histidine kinase in two-component regulatory system with EvgA (NCBI) from Escherichia coli BW25113

Subject, 1092 a.a., Sensor histidine kinase RcsC from Pseudomonas sp. RS175

 Score =  291 bits (745), Expect = 2e-82
 Identities = 184/522 (35%), Positives = 275/522 (52%), Gaps = 24/522 (4%)

Query: 684  GWQDITETRDLINALEVEKNKAIKATVAKSQFLATMSHEIRTPISSIMGFLELLSGSGLS 743
            GW  +   R L+  L V K  A  A  AK+ F+ATMSHEIRTP+++++G LEL       
Sbjct: 555  GW--VAYLRRLLEQLRVAKASADDANRAKTTFVATMSHEIRTPMNAVIGMLELAQKKAEQ 612

Query: 744  KEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFGAIA 803
                 EAI +A      LL LIG+ILD+ +IESG   L P+  ++  LV++    F  +A
Sbjct: 613  GVVDREAIEVASGAAHGLLDLIGDILDIARIESGRLSLAPERANLRQLVESVARMFEGLA 672

Query: 804  ASKSIALSCSSTFPEHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLGHIDDNHA 863
              K + L        +  V IDP  FKQ++SNLL NA+KFT  G V+++       D   
Sbjct: 673  RHKHLDLPQDLGEAANRDVLIDPLRFKQIVSNLLGNAIKFTDRGQVRLSLQAEPGPDGER 732

Query: 864  V-IKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQ--QTGSGLGLMICKELIKNMQGDLSL 920
            + I++ I D+G G+++++Q+QLF+ ++Q    RQ  ++G+GLGL+I + L + M G L+L
Sbjct: 733  LDIRLRIEDTGCGIARQDQEQLFRPFTQAPHSRQSARSGAGLGLVISRTLCEMMGGSLTL 792

Query: 921  ESHPGIGTTFTITIPVEISQQVATVEAKAEQPITLPEKLSILIADDHPTNRLLLKRQLNL 980
            ES PG GT   + + + +   +A V     +P T   +L IL+ DDHP NRLLL RQL+ 
Sbjct: 793  ESAPGQGTQVEVRLSLPLLDALAPVPKLEVEPATSARRLDILVVDDHPANRLLLSRQLSY 852

Query: 981  LGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQ-----NSSLPIWG 1035
            LG+ V+ A DGVQ L      H+D +I+D NMP+M+G+EL R +R        +   I G
Sbjct: 853  LGHRVEVAEDGVQGLRAWRDGHFDAVISDCNMPSMNGYELARAIRADERIRGQAPAVILG 912

Query: 1036 LTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQV----AHIAPQYRHLDIEAL 1091
             TANAQ  E+++ +  GM+ CLFKP+ L VL+  L  +          A     LD+ +L
Sbjct: 913  FTANAQREEKDRCVEAGMDDCLFKPIGLTVLRARLEDVIDARAGGTESAAAIDDLDLSSL 972

Query: 1092 KNNTANDLQLMQEILMTFQHETHKDLPAAFQALEAGDNRTFHQCIHRIHGAANILNLQKL 1151
            +  T  D   ++E+L T       D        +  D        HRI G A ++  Q L
Sbjct: 973  EELTGGDTASLRELLGTLLRSNTDDEAHLVHLADRRDVPGLADLAHRIKGGARMIQAQHL 1032

Query: 1152 INISHQLE----------ITPVSDDSKPEILQLLNSVKEHIA 1183
            I     LE          +    +D +  + QL   +++H+A
Sbjct: 1033 IAACEALEDACRSADASSVASAVEDVRQAMEQLAQRLQDHLA 1074



 Score =  170 bits (431), Expect = 5e-46
 Identities = 134/559 (23%), Positives = 249/559 (44%), Gaps = 27/559 (4%)

Query: 51  WLASKKNLVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLTLREYADHQKAM 110
           WL  K  L +       A    T + +   G+ ADY  LL + L +++ +  Y    +++
Sbjct: 51  WLRQKGTLRLGASAPDYAPFSITGNGRDYEGLTADYAQLLGQLLQVQVRVLRYPSRAESL 110

Query: 111 DALAEGEVDIVLSHLVTSPPLNNDIAATKPLIIT-------FPALVTTLHDSMRPLTSPK 163
            AL EGE+D++ +         N   A  P ++         P LV  + DS        
Sbjct: 111 QALREGEIDLLGTA--------NGFEADDPALVMSRAYADDLPTLVARIDDSQDLPPDLA 162

Query: 164 PVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGHNDYFIGSNIITSSMISRY 223
              +A + +Y P E +   +P AT+  + +   A+ +V+ G  D ++G +I ++ +IS+ 
Sbjct: 163 GKRLAMLYHYLPPERVEAFYPDATLQLYPSTLSAIGAVAFGQADVYLGDSISSNYLISKN 222

Query: 224 FTHSLNVVKYYNSPRQYNFFLTRKESVILNEVLNRFVDALTNEVRYEVSQNWLDTGNLAF 283
           + +++ +  +     Q   F  R+++  L  ++N  + A+       + + W   G    
Sbjct: 223 YLNNVQLADFSRLEVQPFAFALRRDNARLLRLVNAALQAIPTGENMVIQRRWSAGGASMP 282

Query: 284 LNKPLELTEHEKQWIKQHPNLKVLENPYSPPYSMTDENGSVRGVMGDILNIITLQTGLNF 343
             + L  +  E++W++ HP ++V+ +    P + TDE G +RG+  D+L  I+L+TGL F
Sbjct: 283 GQQALHFSVDEQRWLEAHPRIRVVIDENFLPLTFTDEQGHLRGISADVLARISLRTGLKF 342

Query: 344 SPITVSHNIHAGTQLSPGGWDIIPGAIYSEDRENN--VLFAEAFITTPYVFVMQKAPDSE 401
                        Q+  G  D++     S   E++  + F   ++T P+V V      + 
Sbjct: 343 DIQRGKSVYDLIDQVRSGRADVLAAITISTGAEDDDTLRFTRPYLTNPFVLVTSLKGKAP 402

Query: 402 QTL--KKGMKVAIPYYYELHSQLKEMYPEVEWIQVDNASAAFHKVKEGELDALVATQLNS 459
            TL   +G ++A+     L   L+E + +V+ +   N   A   V  G +D  V + +++
Sbjct: 403 LTLDQMEGKRLALVRGNVLQPYLQETFAKVQLVPAQNVPEAMAMVAAGTVDGAVNSLISA 462

Query: 460 RYMIDHYYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPPSEVLRLTEKWI 519
           RYMI   Y + L      G   A ++ A  R   +L  I++KAL  I P E+  LT +W 
Sbjct: 463 RYMISRQYRDRLQVTSTVGTLPARIALATHRDASQLHGILDKALLGISPEEMDELTNRW- 521

Query: 520 KMPNVTIDTWDLYSEQFYIVT--TLSVLLVGSSLLWGFYLLRSVRRRKVIQGDLEN---- 573
               V ID       +  IV    ++ LL+  +L W  YL R + + +V +   ++    
Sbjct: 522 -RSEVVIDDSYWLRNRTTIVQGFAIAALLLLLALGWVAYLRRLLEQLRVAKASADDANRA 580

Query: 574 QISFRKALSDSLPNPTYVV 592
           + +F   +S  +  P   V
Sbjct: 581 KTTFVATMSHEIRTPMNAV 599