Pairwise Alignments

Query, 387 a.a., EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component (NCBI) from Escherichia coli BW25113

Subject, 380 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Dickeya dianthicola 67-19

 Score =  266 bits (680), Expect = 7e-76
 Identities = 136/348 (39%), Positives = 206/348 (59%), Gaps = 2/348 (0%)

Query: 1   MEQINSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQ 60
           M+   S KK   +   F   A +        Y  W+    +  +T+DAYV GN   +++Q
Sbjct: 1   MQDDKSTKKSGKKTALFIFPAAITICL--SIYFLWTYVGNNTATTEDAYVEGNLVQVTSQ 58

Query: 61  VSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSA 120
           V G++  +   +T+YV++GD++V ++  D  + L+KAK  LA+ VR     +   +Q +A
Sbjct: 59  VGGTIIDIKADNTDYVKRGDVVVVINPIDTKVQLDKAKAQLASTVRAVRNQFANLQQLAA 118

Query: 121 EVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKAL 180
            +   +  Y ++  DY RR  L+K   IS E + H  D +  +KAA+  A   Y A    
Sbjct: 119 AIEMKKTDYNKATADYRRRSGLSKSMAISVEDMNHASDAVNLAKAAVKVAESQYNAALVY 178

Query: 181 VMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVV 240
             NT  +  P V+ A    ++AWL   RT++  PV+G IAQRS+QVG+ +S G +LM++V
Sbjct: 179 TSNTTPDSHPDVLTAEAVFRQAWLDWHRTNVIVPVSGVIAQRSIQVGQHISSGSTLMSIV 238

Query: 241 PARQMWVNANFKETQLTDVRIGQSVNIISDLYGENVVFHGRVTGINMGTGNAFSLLPAQN 300
           P   +WV ANFKETQL ++++GQ+  + SD++G  V + G++ GI  GTG+AFSLLPAQN
Sbjct: 239 PLDSIWVTANFKETQLGNIKVGQNATLTSDVHGRGVQYKGKILGIEPGTGSAFSLLPAQN 298

Query: 301 ATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSMTATIDTKNEDIAEM 348
           ATGNWIK+VQR+PV + LD   L ++PLR GLSM   +DT +    E+
Sbjct: 299 ATGNWIKVVQRIPVRIELDKNLLSQYPLRPGLSMKVKVDTNSVGTGEI 346