Pairwise Alignments

Query, 385 a.a., CPS-53 (KpLE1) prophage; predicted prophage CPS-53 integrase (NCBI) from Escherichia coli BW25113

Subject, 412 a.a., DUF4102 domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  230 bits (586), Expect = 6e-65
 Identities = 141/393 (35%), Positives = 221/393 (56%), Gaps = 16/393 (4%)

Query: 2   LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ 61
           LT  QI+AAKP +KP +L DG G++L V    ++ W+L+Y+  GKEK+L +G YP +T++
Sbjct: 3   LTDLQIKAAKPADKPIKLADGGGMFLLVTPQDQRYWRLKYRFGGKEKLLALGVYPDVTIK 62

Query: 62  EARDKAWTARKDISVGIDPVKAKKASSNN------NSFSAIYKEWYEHKKQVWSVGYATE 115
            AR     A+K ++ GIDP  A+KA  ++      +SF  + +EW+      W+  ++++
Sbjct: 63  TARQLRDDAKKQLANGIDPSDARKAKKSSQLLDGPDSFENVAREWFAKNVATWAETHSSK 122

Query: 116 LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG 175
           + +  + D+ P+IG   I  I    +L V R+ E RGA + A++A +  G++ RYA+ TG
Sbjct: 123 VLQRLESDVFPLIGTKPIGSITAPMILAVARKIEARGANDTAHRAVQNAGQIMRYAVATG 182

Query: 176 RAKYNPAPDLADAMKGYRKKNFPFLPADQ-IPAFNKALATFSGSIVSLIATKVLRYTALR 234
           RA+ +P  DL  A+   R K+F  L   + +    +A   F G++V   A ++     +R
Sbjct: 183 RAERDPTGDLRGALPPVRHKHFAALTDPKLVGELLRAFDAFEGTVVVKAALQLAPLVFVR 242

Query: 235 TKELRSMLWKNVDFENRIITIDAS-VMKGRKI-HVVPMSDQVVELLTTLSSITKPVSEFV 292
             ELR   W ++D +       AS   KG  I H+VP+S Q VE+L  L   T    E +
Sbjct: 243 PGELRKAKWADIDLDAGSWAFHASKARKGETIEHLVPLSTQAVEILRDLHQYTGN-RECL 301

Query: 293 FAGRNDKKKPICENAVLLVIKQIGYEGLE--SGHGFRHEFSTIMNEH--EWPADAIEVQL 348
           F GR D +KP+ E AV   ++++GY+     +GHGFR    TI+ E   E P   IE QL
Sbjct: 302 FPGR-DPRKPMSEAAVNAALRRLGYDTKTEITGHGFRAMARTILAEQLGEDP-HVIEQQL 359

Query: 349 AHANGGSVRGIYNHAQYLDKRREMMQWWADWLD 381
           AH    ++   YN  +Y+++RR MMQ W+D+LD
Sbjct: 360 AHRVPDALGRAYNRTKYIEQRRAMMQRWSDYLD 392