Pairwise Alignments

Query, 385 a.a., CPS-53 (KpLE1) prophage; predicted prophage CPS-53 integrase (NCBI) from Escherichia coli BW25113

Subject, 419 a.a., integrase arm-type DNA-binding domain-containing protein from Dickeya dianthicola 67-19

 Score =  229 bits (583), Expect = 1e-64
 Identities = 135/402 (33%), Positives = 218/402 (54%), Gaps = 23/402 (5%)

Query: 1   MLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTL 60
           MLT  ++ +AKP  K Y+L D  GLYL V  SG K+W  RY++ GKE  L  G YP  TL
Sbjct: 1   MLTDSKVRSAKPLAKSYKLTDSQGLYLTVSASGAKLWYFRYRLGGKESRLAFGPYPQTTL 60

Query: 61  QEARDKAWTARKDISVGIDPVKAKKASS----NNNSFSAIYKEWYEHKKQVWSVGYATEL 116
            EAR+K   ARK ++ GI P + +KA++     + +F  + + W+    ++WS  +A ++
Sbjct: 61  AEAREKRDAARKLLASGISPSQLRKANNPAVDESRTFQYVAQAWHTSSLKLWSDAHADKI 120

Query: 117 AKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTGR 176
                  + P IG ++I  +E   L ++++  +D+G  + A + R+   ++ R+A+  G 
Sbjct: 121 LICLKRYVFPTIGVMDIAQVETRHLAQLVKAIDDKGVHDVAGRVRQHLTKIMRHAVQQGV 180

Query: 177 AKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTK 236
            KYNPA DL   +     ++ P LP  ++P     + ++ G +++ +A ++  +  LR+ 
Sbjct: 181 IKYNPAYDLDGVVTPVVTQHHPALPLKRLPELLAKIGSYKGRMLTRLALELNLHVFLRSS 240

Query: 237 ELRSMLWKNVDFENRIITIDAS---------VMKGRKI---HVVPMSDQVVELLTTLSSI 284
           ELR   W   + +  I ++ A            +G K+   H+VP+S Q V LL  + +I
Sbjct: 241 ELRFARWDEFNLKAHIWSVPARREAVNSVRFSARGAKMKDEHLVPLSRQAVALLKQIQAI 300

Query: 285 TKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLES---GHGFRHEFSTIMNEH-EWP 340
           +   S FVF   +   KP+ EN +   ++ IGY G +S   GHGFR    + +NE   W 
Sbjct: 301 SGE-SVFVFPSAHTLNKPMSENTINKALRVIGY-GTKSEVCGHGFRTMACSALNESGRWS 358

Query: 341 ADAIEVQLAHANGGSVRGIYNH-AQYLDKRREMMQWWADWLD 381
            DAIE Q++H     VR  Y H A++L+ R EMMQWW+D+LD
Sbjct: 359 KDAIERQMSHKERNGVRAAYVHKAEHLEARIEMMQWWSDYLD 400