Pairwise Alignments

Query, 312 a.a., DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) from Escherichia coli BW25113

Subject, 291 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  167 bits (423), Expect = 3e-46
 Identities = 102/278 (36%), Positives = 150/278 (53%), Gaps = 1/278 (0%)

Query: 8   IINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL 67
           I NLDLDL+R+F AVADL + +AAA  V R+QSAVS QM RL + VG  L  R GR    
Sbjct: 2   IRNLDLDLIRSFAAVADLGSISAAARKVGRSQSAVSLQMDRLAEAVGFSLLERRGRAVSP 61

Query: 68  TEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPK 127
           T  G   L  AR++L  ND   +  +       L +G   +  + +L  +L R+S+ +P+
Sbjct: 62  TPRGAAFLEDARRLLDLNDRILTQHVHGAFAQPLRLGFVQDVGEQVLQRILYRLSASFPQ 121

Query: 128 LALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPI 187
             + VRV    +M +ML ++E+D+ V     S   A  L      W  A +  L +  P+
Sbjct: 122 APITVRVCTTTHMLDMLRAEELDVAVGFRSESELPASLLLRESMVWIAARQLRLDREAPV 181

Query: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247
           PLVL + P   R   +A LN A  P+R+A+ + +LP + AAV AG+GVT R    + PDL
Sbjct: 182 PLVLFEHPCSCRTAAIAALNAAGRPFRIAFTSPSLPGLMAAVGAGMGVTVRSPRALRPDL 241

Query: 248 RVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAME 285
            V++ +D    LPD E+LL   P +     Q + + ++
Sbjct: 242 AVVADLD-RAALPDMEFLLYTRPGARPPALQKVEEVLQ 278