Pairwise Alignments

Query, 312 a.a., DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) from Escherichia coli BW25113

Subject, 283 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  148 bits (374), Expect = 1e-40
 Identities = 90/258 (34%), Positives = 141/258 (54%), Gaps = 4/258 (1%)

Query: 10  NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQ-LVGKELFARHGRNKLLT 68
           +LD D+LRTFVA+A+   F  A   V RTQSAVS QM+RLE+ ++ ++LF R GR   LT
Sbjct: 6   SLDADVLRTFVAIAEQGGFTRAGEVVNRTQSAVSMQMKRLEEDILQRQLFERDGRQVRLT 65

Query: 69  EHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKL 128
             G  LLGYAR+IL+ + E  ++L   ++ G++ IG  D+ A   LP +L+  +  YP +
Sbjct: 66  AEGQVLLGYARRILKLHGEVFNTLRMPHMVGLVRIGTPDDYAMRFLPTILSSFAQAYPLV 125

Query: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIP 188
            ++V    +    +++  Q++DL + T  P       LR     W  A  +   +  P+P
Sbjct: 126 QVEVHCDSSK---QLMLRQDLDLTIVTREPGNEIGQLLRQERLVWAAAEGFCPHEQRPMP 182

Query: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248
           + L +     R      L    I +R+AY + +L A+ A V AGL VTA+   ++  ++R
Sbjct: 183 VALFNTDCFCRAWTCNALEAQGIDYRIAYTSPSLAAIFAIVTAGLAVTAQLQSLIGGNIR 242

Query: 249 VLSGVDGLPPLPDTEYLL 266
           +L   +GLP LP    +L
Sbjct: 243 ILGESEGLPQLPMANVML 260