Pairwise Alignments

Query, 325 a.a., NADH dehydrogenase subunit H (NCBI) from Escherichia coli BW25113

Subject, 335 a.a., NADH:ubiquinone oxidoreductase from Pseudomonas simiae WCS417

 Score =  491 bits (1263), Expect = e-143
 Identities = 234/326 (71%), Positives = 285/326 (87%), Gaps = 5/326 (1%)

Query: 1   MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQL 60
           M+W +PE+I+++++++KA+VILL VV  GA +SF ERRLLG +Q+RYGPNRVG  G  Q+
Sbjct: 1   MTWFTPEVIDVIISVVKAIVILLAVVVAGALLSFVERRLLGWWQDRYGPNRVGPFGMFQI 60

Query: 61  VADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFL 120
            ADM+KMFFKEDW P F+D+VIFTLAP++A ++LL+AFAI+P++P W VADLNIG+LFF 
Sbjct: 61  AADMLKMFFKEDWTPPFADKVIFTLAPVVAMSALLIAFAIIPITPTWGVADLNIGLLFFF 120

Query: 121 MMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMTDIV 180
            MAGL+VYAVLFAGWSSNNK++LLG++RASAQT+SYEVF+GL+LMG+V Q GSFNM DIV
Sbjct: 121 AMAGLSVYAVLFAGWSSNNKFALLGSLRASAQTVSYEVFMGLALMGIVVQVGSFNMRDIV 180

Query: 181 NSQA-HVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFV 239
             QA ++W +IPQFFGF TF IAGVAV HRHPFDQPEAEQELADGYHIEY+GMK+G+FFV
Sbjct: 181 EYQAQNLWFIIPQFFGFCTFFIAGVAVTHRHPFDQPEAEQELADGYHIEYAGMKWGMFFV 240

Query: 240 GEYIGIVTISALMVTLFFGGWQGP--LLP--PFIWFALKTAFFMMMFILIRASLPRPRYD 295
           GEYIGI+ ISAL+VTLFFGGW GP  +LP   F WF LKTAFF+M+FIL+RAS+PRPRYD
Sbjct: 241 GEYIGIILISALLVTLFFGGWHGPFGILPQLAFFWFFLKTAFFIMLFILLRASIPRPRYD 300

Query: 296 QVMSFGWKICLPLTLINLLVTAAVIL 321
           QVM F W+ CLPLTLINLLVTAAV+L
Sbjct: 301 QVMDFSWRFCLPLTLINLLVTAAVVL 326