Pairwise Alignments

Query, 325 a.a., NADH dehydrogenase subunit H (NCBI) from Escherichia coli BW25113

Subject, 335 a.a., NADH-quinone oxidoreductase subunit H from Pseudomonas putida KT2440

 Score =  502 bits (1292), Expect = e-147
 Identities = 240/327 (73%), Positives = 287/327 (87%), Gaps = 5/327 (1%)

Query: 1   MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQL 60
           MSW +PE+I+++LT+L+A+V+LL VV CGA +SF ERRLLG +Q+RYGPNRVG  G  Q+
Sbjct: 1   MSWFTPEVIDVILTVLRAIVVLLAVVVCGALLSFVERRLLGWWQDRYGPNRVGPFGMFQI 60

Query: 61  VADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFL 120
            ADM+KMFFKEDW P F DRVIFTLAP++A ++LL+AF ++P++P W VADLNIG+LFF 
Sbjct: 61  AADMLKMFFKEDWNPPFVDRVIFTLAPVVAMSALLIAFVVIPITPTWGVADLNIGLLFFF 120

Query: 121 MMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMTDIV 180
            MAGL+VYAVLFAGWSSNNKY+LLG++RASAQT+SYEVFLGL+LMGVV Q GSFNM DIV
Sbjct: 121 AMAGLSVYAVLFAGWSSNNKYALLGSLRASAQTVSYEVFLGLALMGVVVQVGSFNMRDIV 180

Query: 181 NSQA-HVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFV 239
             QA ++W +IPQFFGF TF IAGVAV HRHPFDQPEAEQELADGYHIEY+GMK+G+FFV
Sbjct: 181 EYQAQNLWFIIPQFFGFCTFFIAGVAVTHRHPFDQPEAEQELADGYHIEYAGMKWGMFFV 240

Query: 240 GEYIGIVTISALMVTLFFGGWQGP--LLP--PFIWFALKTAFFMMMFILIRASLPRPRYD 295
           GEYIGI+ ISAL+VTLFFGGW GP  +LP   F+WFALKTAFF+M+FIL+RAS+PRPRYD
Sbjct: 241 GEYIGIILISALLVTLFFGGWHGPFGILPQLSFLWFALKTAFFIMLFILLRASIPRPRYD 300

Query: 296 QVMSFGWKICLPLTLINLLVTAAVILW 322
           QVM F WK CLPLTLINLLVTAA++L+
Sbjct: 301 QVMDFSWKFCLPLTLINLLVTAAIVLY 327