Pairwise Alignments

Query, 325 a.a., NADH dehydrogenase subunit H (NCBI) from Escherichia coli BW25113

Subject, 348 a.a., NADH ubiquinone oxidoreductase I chain H from Agrobacterium fabrum C58

 Score =  247 bits (631), Expect = 3e-70
 Identities = 134/340 (39%), Positives = 200/340 (58%), Gaps = 26/340 (7%)

Query: 2   SWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLV 61
           S++ P LI +  ++L  V +L+ +    AF+   +R++    Q R GPN VG  G  Q  
Sbjct: 7   SYVWPALIMVGQSLLLLVCLLVAI----AFLLLADRKVWAAVQLRRGPNVVGPFGLFQSF 62

Query: 62  ADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLM 121
           AD++K   KE  IP  +++ +F LAP++A T  L  +A++P + GWVVA++N+GIL+   
Sbjct: 63  ADLLKFILKEPVIPAGANKAVFLLAPLVAVTLALATYAVIPFADGWVVANINVGILYIFA 122

Query: 122 MAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMTDIVN 181
           ++ L VY ++  GW+SN+KY  LGA+R++AQ +SYEV +GL ++ V+   GS N+TDIV 
Sbjct: 123 ISSLEVYGIIMGGWASNSKYPFLGALRSAAQMVSYEVSIGLVIVTVLLCVGSLNLTDIVL 182

Query: 182 SQAH-------------VWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIE 228
           +Q                W+ +  F  FI F I+G+A  +R PFD PEAE EL  G+ +E
Sbjct: 183 AQRTGLGTMMGLPASFLDWHWLSLFPMFIVFFISGLAETNRPPFDLPEAESELVAGHMVE 242

Query: 229 YSGMKFGLFFVGEYIGIVTISALMVTLFFGGWQGPL--------LPPFIWFALKTAFFMM 280
           Y    + +F +GEY  IV I  L   LF GGW  P+        +P  +WFALK      
Sbjct: 243 YGSTPYMMFMLGEYAAIVLICCLTTILFLGGWL-PIVDVWFLNWVPGIVWFALKGCMVFF 301

Query: 281 MFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVI 320
           M  L +A +PR RYDQ+M  GWK+ LPL+L  +++ A V+
Sbjct: 302 MIALTKAFVPRYRYDQLMRLGWKVFLPLSLAMVVIVAFVL 341