Pairwise Alignments

Query, 440 a.a., short chain fatty acid transporter (NCBI) from Escherichia coli BW25113

Subject, 472 a.a., putative short chain fatty acid transporter from Pseudomonas putida KT2440

 Score =  229 bits (583), Expect = 2e-64
 Identities = 151/446 (33%), Positives = 219/446 (49%), Gaps = 29/446 (6%)

Query: 4   RISRFMTR---FVSRWLPDPLIFAMLLTLLTFVIALWLTPQTPISMVKMWGDGFWNLLAF 60
           R +RF  R   +  RW PD  +FA L  LL  + AL +  + P    K +GDGFW+L+ F
Sbjct: 9   RSARFALRCSNWAERWFPDSWVFAALAVLLVCIGALAMGAK-PTDTAKAFGDGFWSLIPF 67

Query: 61  GMQMALIIVTGHALASSAPVKSLLRTAASAAKTPVQGVMLVTFFGSVACVINWGFGLVVG 120
            MQMA +++ G+ +ASS P   L+   A         V  V     +A ++NWG  LV G
Sbjct: 68  TMQMAFVVIGGYVVASSPPAARLIDRLARIPGNGRSAVCWVALISMLASLLNWGLSLVFG 127

Query: 121 AMFAREVARRVP-GSDYPLLIACAYIGF-LTWGGGFSGSMPLLAATPGN---PVEHIAGL 175
            +  R +ARR     DY    A AY+G    W  G S S   L A P +    +  I G+
Sbjct: 128 GLLVRALARRTDLKMDYRAAGAAAYLGLGAVWALGLSSSAAQLQANPASLPPSILSITGV 187

Query: 176 IPVGDTLFSGFNIFITVALIVVMPFITRMMMPKPSDVVS-----IDPKLLMEEADFQKQL 230
           IP  +T+F   +  +  AL+VV   I     P P+   S     +DP      A      
Sbjct: 188 IPFTETIFLWQSGVMLAALVVVSLVIAYATAPGPNSARSAEDCGVDPSFTAPPA------ 241

Query: 231 PKDAPPSERLEESRILTLIIGALGIAYLAMYFSEHGFNITI---NTVNLMFMIAGLLLHK 287
           P+   P E LE S IL L++ AL   +L   F+       I   NT NL+F++ G LLH 
Sbjct: 242 PQRTRPGEWLEHSPILILLLVALAAGWLYQEFATKPAITAISGLNTYNLLFIMLGALLHW 301

Query: 288 TPMAYMRAISAAARSTAGILVQFPFYAGIQLMM------EHSGLGGLITEFFINVANKDT 341
            P +++ A++ A  +T G+L+QFP Y  I  ++      +   L   I+ FF  +A  DT
Sbjct: 302 RPRSFLDAVARAVPTTTGVLIQFPLYGSIAAILTQVKGVDEQTLAHHISLFFTQIATHDT 361

Query: 342 FPVMTFFSSALINFAVPSGGGHWVIQGPFVIPAAQALGADLGKSVMAIAYGEQWMNMAQP 401
           + V+    SA++ F +PSGGG W+I+ P+V+  A  L   LG +V      E   N+  P
Sbjct: 362 YAVLMGVYSAVLGFFIPSGGGKWIIEAPYVMLVANDLQYHLGWAVQIYNAAEALPNLINP 421

Query: 402 FWALPALAIAGLGVRDIMGYCITALL 427
           F+ LP L + GL  RD++G+    LL
Sbjct: 422 FYMLPLLGVLGLKARDLIGFSFVQLL 447