Pairwise Alignments

Query, 367 a.a., outer membrane porin protein C (NCBI) from Escherichia coli BW25113

Subject, 368 a.a., porin OmpC from Serratia liquefaciens MT49

 Score =  477 bits (1227), Expect = e-139
 Identities = 247/381 (64%), Positives = 283/381 (74%), Gaps = 27/381 (7%)

Query: 1   MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYFSDNKDVDGDQTYMRLG 60
           MK  +L++++PALL AGAANAAE+YNKDGNKLDLYGKVDGLHYFSD+K  DGDQTY+R G
Sbjct: 1   MKRNILAVVIPALLAAGAANAAEIYNKDGNKLDLYGKVDGLHYFSDDKGNDGDQTYVRFG 60

Query: 61  FKGETQVTDQLTGYGQWEYQIQGN--SAENENNSWTRVAFAGLKFQDVGSFDYGRNYGVV 118
           FKGETQ+TDQLTGYGQWEY +Q N   A+    + TR+ FAGLKF D GSFDYGRNYGV+
Sbjct: 61  FKGETQITDQLTGYGQWEYNVQANHDEAQGTEGTKTRLGFAGLKFADYGSFDYGRNYGVL 120

Query: 119 YDVTSWTDVLPEFGGDTYG-SDNFMQQRGNGFATYRNTDFFGLVDGLNFAVQYQGKNGNP 177
           YDV  WTD+LPEFGGDTY  +DNFM  R NG ATYRN +FFGLVDGLNFAVQYQGKN   
Sbjct: 121 YDVEGWTDMLPEFGGDTYTYTDNFMTGRTNGVATYRNNNFFGLVDGLNFAVQYQGKN--- 177

Query: 178 SGEGFTSGVTNNGRDALRQNGDGVGGSITYDY-EGFGIGGAISSSKRTDAQNTAAYIGNG 236
                     N+GR   +QNGDG G S TYD  EG   G A +SS RTD Q   +  G G
Sbjct: 178 ---------ENDGRALKKQNGDGWGLSSTYDIGEGVSFGAAYASSDRTDKQTNNSTAG-G 227

Query: 237 DRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSL--GWANKAQNFEAVAQYQFDFGLRP 294
           D+A+ +T G KYDANN+YLAA Y++T N T  G    G ANK QNFE  AQYQFDFGLRP
Sbjct: 228 DKADAWTVGAKYDANNVYLAAMYSETRNMTPYGDFDAGIANKTQNFEVTAQYQFDFGLRP 287

Query: 295 SLAYLQSKGKNL------GRGYD--DEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNQ 346
            ++YLQSKGKNL      G  +   D D++KYV VG TYYFNKNMSTYVDYKINLLDDN+
Sbjct: 288 EVSYLQSKGKNLAGHTNHGSSFSGGDADLVKYVSVGTTYYFNKNMSTYVDYKINLLDDNE 347

Query: 347 FTRDAGINTDNIVALGLVYQF 367
           FT+  G  TD+IV +GLVYQF
Sbjct: 348 FTKATGTATDDIVGVGLVYQF 368