Pairwise Alignments

Query, 367 a.a., outer membrane porin protein C (NCBI) from Escherichia coli BW25113

Subject, 350 a.a., Outer membrane pore protein E precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  405 bits (1042), Expect = e-118
 Identities = 206/363 (56%), Positives = 262/363 (72%), Gaps = 24/363 (6%)

Query: 9   LVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYFSDNKDVDGDQTYMRLGFKGETQVT 68
           +V +++ + + +AAEVYNK+GNKLD+YGKV  +HY SD    DGDQ+Y+R GFKGETQ+ 
Sbjct: 8   IVVSIIASASVHAAEVYNKNGNKLDVYGKVKAMHYMSDYDSKDGDQSYVRFGFKGETQIN 67

Query: 69  DQLTGYGQWEYQIQGNSAENENNSW-TRVAFAGLKFQDVGSFDYGRNYGVVYDVTSWTDV 127
           DQLTGYG+WE +   N AE++++   TR+AFAGLK +D+GSFDYGRN G +YDV +WTD+
Sbjct: 68  DQLTGYGRWEAEFASNKAESDSSQQKTRLAFAGLKLKDIGSFDYGRNLGALYDVEAWTDM 127

Query: 128 LPEFGGDTYG-SDNFMQQRGNGFATYRNTDFFGLVDGLNFAVQYQGKNGNPSGEGFTSGV 186
            PEFGGD+   +DNFM +R +G ATYRNTDFFG+VDGL+  +QYQGK             
Sbjct: 128 FPEFGGDSSAQTDNFMTKRASGLATYRNTDFFGIVDGLDLTLQYQGK------------- 174

Query: 187 TNNGRDALRQNGDGVGGSITYDYEG--FGIGGAISSSKRTDAQNTAAYIGNGDRAETYTG 244
            N  RD  +QNGDG G S++YD+ G  F + GA + S RT  QN     G GD+AE +  
Sbjct: 175 -NEDRDVKKQNGDGFGTSVSYDFGGSDFAVSGAYTLSDRTREQNLQRR-GTGDKAEAWAT 232

Query: 245 GLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGK 304
           G+KYDAN+IY+A  Y++T N T V S G+ANK QNFEAV QYQFDFGLRPSL Y+ SKGK
Sbjct: 233 GVKYDANDIYIATFYSETRNMTPV-SGGFANKTQNFEAVIQYQFDFGLRPSLGYVLSKGK 291

Query: 305 NLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNQFTRDAGINTDNIVALGLV 364
           ++  G   ED++ Y+DVGATYYFNKNMS +VDYKIN LD +      GIN D+IVA+GL 
Sbjct: 292 DI-EGVGSEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSD---NTLGINDDDIVAIGLT 347

Query: 365 YQF 367
           YQF
Sbjct: 348 YQF 350