Pairwise Alignments

Query, 367 a.a., outer membrane porin protein C (NCBI) from Escherichia coli BW25113

Subject, 398 a.a., Outer membrane protein C precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  473 bits (1217), Expect = e-138
 Identities = 255/398 (64%), Positives = 294/398 (73%), Gaps = 31/398 (7%)

Query: 1   MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYFSDNKDVDGDQTYMRLG 60
           M  KVL+LLVPALLVAGAANAAEVYNK+GNKLDLYGKVDGL YFSDN   DGDQ+Y R G
Sbjct: 1   MNRKVLALLVPALLVAGAANAAEVYNKNGNKLDLYGKVDGLRYFSDNAGDDGDQSYARFG 60

Query: 61  FKGETQVTDQLTGYGQWEYQIQGNSAENEN-NSWTRVAFAGLKFQDVGSFDYGRNYGVVY 119
           FKGETQ+ D LTGYGQWEY I+ N+ E E  NSWTR+ FAGLKF + GSFDYGRNYGV+Y
Sbjct: 61  FKGETQINDMLTGYGQWEYNIKVNTTEGEGANSWTRLGFAGLKFGEYGSFDYGRNYGVIY 120

Query: 120 DVTSWTDVLPEFGGDTY-GSDNFMQQRGNGFATYRNTDFFGLVDGLNFAVQYQGKNGNP- 177
           D+ +WTD LPEFGGDTY  +D +M  R NG ATYRNTDFFGLV+GLNFA+QYQG N +P 
Sbjct: 121 DIEAWTDALPEFGGDTYTQTDVYMLGRTNGVATYRNTDFFGLVEGLNFALQYQGNNEDPG 180

Query: 178 SGEGFTSG--VTNNGRDALRQNGDGVGGSITYDYE-GFGIGGAISSSKRTDAQNTAA--- 231
           +GEG  +G    +  R   R+NGDG G S +YD++ G  +G A SSS RTD Q  +    
Sbjct: 181 AGEGTANGSDADSGTRKLARENGDGFGMSTSYDFDFGLSLGAAYSSSDRTDNQVASGRGD 240

Query: 232 ---YIGN----GDRAETYTGGLKYDANNIYLAAQYTQTYNATRV-----GSLGWANKAQN 279
              Y GN    G+ AE +T G+KYDA N+YLAA Y +T N T       G  G ANK QN
Sbjct: 241 GHHYYGNSYAGGETAEAWTVGVKYDAYNVYLAAMYAETRNMTYYGGGDGGDGGIANKTQN 300

Query: 280 FEAVAQYQFDFGLRPSLAYLQSKGKNLG------RG---YDDEDILKYVDVGATYYFNKN 330
           FE VAQYQFDFGLRPS+AYLQSKGK+LG      RG   Y D+D++KYVDVG TYYFNKN
Sbjct: 301 FEVVAQYQFDFGLRPSIAYLQSKGKDLGGQDMDSRGNYRYTDKDLVKYVDVGMTYYFNKN 360

Query: 331 MSTYVDYKINLLD-DNQFTRDAGINTDNIVALGLVYQF 367
           MSTYVDYKINLLD D+ F  + GI TD+IV +GLVYQF
Sbjct: 361 MSTYVDYKINLLDEDDDFYANNGIATDDIVGVGLVYQF 398